RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 POM121Q96HA1 1249 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 NSL1Q96IY1 281 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 PSD2Q9BQI7 771 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 PTDSS2Q9BVG9 487 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 BCO1Q9HAY6 547 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 SPAG4Q9NPE6 437 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 KLHL13Q9P2N7 655 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 SLC13A4Q9UKG4 626 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 PACSIN3Q9UKS6 424 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 HCFC1P51610 2035 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 HRNRQ86YZ3 2850 aaPredicted RBP8.58□□□□□ -1.04
SRP54-210ENST00000556380 A0A087WUJ7 227 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 ZNF724A8MTY0 619 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 FTCDNL1E5RQL4 147 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 CXCR6O00574 342 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 HNRNPRO43390 633 aaKnown RBP8.58□□□□□ -1.04
SRP54-210ENST00000556380 IFNA14P01570 189 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 YES1P07947 543 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 PNMTP11086 282 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 HSD17B1P14061 328 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 GGT1P19440 569 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 FPR1P21462 350 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 AGTR1P30556 359 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 NTF4P34130 210 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 SLC16A1P53985 500 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 CDH12P55289 794 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 OR2B6P58173 313 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 SELENOWP63302 87 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 SIRPAP78324 504 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 SLC35A1P78382 337 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 RASGEF1BQ0VAM2 473 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 CEACAM7Q14002 265 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 ALG10BQ5I7T1 473 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 C1orf140Q5VVS0 124 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 ZNF613Q6PF04 617 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 PAQR6Q6TCH4 344 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 MEX3BQ6ZN04 569 aaKnown RBP8.58□□□□□ -1.04
SRP54-210ENST00000556380 NUFIP2Q7Z417 695 aaKnown RBP8.58□□□□□ -1.04
SRP54-210ENST00000556380 RANBP3LQ86VV4 465 aaPredicted RBP8.58□□□□□ -1.04
SRP54-210ENST00000556380 CARM1Q86X55 608 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 CCDC103Q8IW40 242 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 PGAM4Q8N0Y7 254 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 ZNF610Q8N9Z0 462 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 BCAS4Q8TDM0 211 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 KTI12Q96EK9 354 aaPredicted RBP8.58□□□□□ -1.04
SRP54-210ENST00000556380 DNAJA3Q96EY1 480 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 SLC47A1Q96FL8 570 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 MCHR1Q99705 422 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 OPN3Q9H1Y3 402 aaPredicted RBP8.58□□□□□ -1.04
SRP54-210ENST00000556380 TMEM27Q9HBJ8 222 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 FOXD3Q9UJU5 478 aaPredicted RBP8.58□□□□□ -1.04
SRP54-210ENST00000556380 BAG5Q9UL15 447 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 EMC9Q9Y3B6 208 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 CACNA1DQ01668 2161 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 PDZD2O15018 2839 aa8.58□□□□□ -1.04
SRP54-210ENST00000556380 MPDZO75970 2070 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 FREM1Q5H8C1 2179 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 ALPK2Q86TB3 2170 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 CSMD1Q96PZ7 3565 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 ELOA3DA6NLF2 546 aaPredicted RBP8.57□□□□□ -1.04
SRP54-210ENST00000556380 B2RBV5 119 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 EEF1E1-BLOC1S5C9J1V9 151 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 EEF1E1O43324 174 aaKnown RBP8.57□□□□□ -1.04
SRP54-210ENST00000556380 EIF1BO60739 113 aaKnown RBP8.57□□□□□ -1.04
SRP54-210ENST00000556380 GPIP06744 558 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 PRF1P14222 555 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 COX6B1P14854 86 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 CD33P20138 364 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 TNFRSF1BP20333 461 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 EDNRAP25101 427 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 IDUAP35475 653 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 OR1E2P47887 323 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 MNAT1P51948 309 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 CTBP2P56545 445 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 SORDQ00796 357 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 LTBQ06643 244 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 FAM27E3Q08E93 113 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 ELOA3BQ3SY89 546 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 LRRC23Q53EV4 343 aaPredicted RBP8.57□□□□□ -1.04
SRP54-210ENST00000556380 ENTPD8Q5MY95 495 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 PPP4R4Q6NUP7 873 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 WDR88Q6ZMY6 472 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 CBLL1Q75N03 491 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 TSEN54Q7Z6J9 526 aaKnown RBP8.57□□□□□ -1.04
SRP54-210ENST00000556380 LUZP2Q86TE4 346 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 P3H2Q8IVL5 708 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 RNF148Q8N7C7 305 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 TMEM99Q8N816 258 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 ZIC4Q8N9L1 334 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 RBM15BQ8NDT2 890 aaKnown RBP8.57□□□□□ -1.04
SRP54-210ENST00000556380 ELOA3Q8NG57 546 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 OR6S1Q8NH40 331 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 MFSD8Q8NHS3 518 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 VANGL1Q8TAA9 524 aaPredicted RBP8.57□□□□□ -1.04
SRP54-210ENST00000556380 SLC26A7Q8TE54 656 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 PROX1Q92786 737 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 TAAR8Q969N4 342 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 ZNF300Q96RE9 604 aaPredicted RBP8.57□□□□□ -1.04
SRP54-210ENST00000556380 CDRT15Q96T59 188 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 KCTD14Q9BQ13 255 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms