RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 ABHD12BQ7Z5M8 362 aaPredicted RBP11.11□□□□□ -0.63
SNX6-207ENST00000556303 KRT73Q86Y46 540 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 LSMEM1Q8N8F7 131 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 POMGNT2Q8NAT1 580 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 TSPEARQ8WU66 669 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 SMAP2Q8WU79 429 aaPredicted RBP11.11□□□□□ -0.63
SNX6-207ENST00000556303 C3orf49Q96BT1 292 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 POM121Q96HA1 1249 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 MAGEB18Q96M61 343 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 Q96MF0 132 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 EBF4Q9BQW3 602 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 GSX1Q9H4S2 264 aaPredicted RBP11.11□□□□□ -0.63
SNX6-207ENST00000556303 TMEM38AQ9H6F2 299 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 CCDC167Q9P0B6 97 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 UPB1Q9UBR1 384 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 LAMP3Q9UQV4 416 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 RASD1Q9Y272 281 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 CHST2Q9Y4C5 530 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 MAGED1Q9Y5V3 778 aaPredicted RBP11.11□□□□□ -0.63
SNX6-207ENST00000556303 SLC25A15Q9Y619 301 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 HEATR1Q9H583 2144 aaKnown RBP11.11□□□□□ -0.63
SNX6-207ENST00000556303 PRORSD1PA6NEY8 169 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 EVPLLA8MZ36 301 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 TMEM229AB2RXF0 380 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 CLOCKO15516 846 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 OR2T1O43869 369 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 RAMP1O60894 148 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 FZD7O75084 574 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 HEXAP06865 529 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 ARAFP10398 606 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 GPX2P18283 190 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 MPGP29372 298 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 ATP5J2P56134 94 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 FAPQ12884 760 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 OR7A5Q15622 319 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 GABRA6Q16445 453 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 GCNT6Q5T4J0 391 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 C1orf140Q5VVS0 124 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 TMEM225Q6GV28 225 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 ALKBH2Q6NS38 261 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 DHRS4L2Q6PKH6 230 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 C6orf89Q6UWU4 347 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 CASP12Q6UXS9 341 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 NET1Q7Z628 596 aaPredicted RBP11.1□□□□□ -0.63
SNX6-207ENST00000556303 ATG4DQ86TL0 474 aaPredicted RBP11.1□□□□□ -0.63
SNX6-207ENST00000556303 CADM2Q8N3J6 435 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 OR9K2Q8NGE7 335 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 MFSD8Q8NHS3 518 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 DNAJA4Q8WW22 397 aaPredicted RBP11.1□□□□□ -0.63
SNX6-207ENST00000556303 CKAP2Q8WWK9 683 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 ZNF317Q96PQ6 595 aaPredicted RBP11.1□□□□□ -0.63
SNX6-207ENST00000556303 ZNF607Q96SK3 696 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 MRGBPQ9NV56 204 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 SLC25A37Q9NYZ2 338 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 TRIM33Q9UPN9 1127 aa11.1□□□□□ -0.63
SNX6-207ENST00000556303 TRBV5-3A0A0A0MS03 114 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 SHISA9B4DS77 424 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 SERPINB7O75635 380 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 RAD51DO75771 328 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 ITGA5P08648 1049 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 NUDT7P0C024 238 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 PNMTP11086 282 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 SLC6A2P23975 617 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 P2RY4P51582 365 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 CDK6Q00534 326 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 AGKQ53H12 422 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 RPS26P11Q5JNZ5 115 aaPredicted RBP11.09□□□□□ -0.63
SNX6-207ENST00000556303 PAGE3Q5JUK9 113 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 METTL21CQ5VZV1 264 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 FAM91A1Q658Y4 838 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 CLEC9AQ6UXN8 241 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.09□□□□□ -0.63
SNX6-207ENST00000556303 SERPINA11Q86U17 422 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 DTX2Q86UW9 622 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 MSRB3Q8IXL7 192 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 DEPDC4Q8N2C3 294 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 TMEM99Q8N816 258 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 ANKK1Q8NFD2 765 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 MAL2Q969L2 176 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 SLCO5A1Q9H2Y9 848 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 MOV10Q9HCE1 1003 aaKnown RBP11.09□□□□□ -0.63
SNX6-207ENST00000556303 OBP2BQ9NPH6 170 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 CISD1Q9NZ45 108 aaKnown RBP11.09□□□□□ -0.63
SNX6-207ENST00000556303 VAPAQ9P0L0 249 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 SLAMF8Q9P0V8 285 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 RPS6KB2Q9UBS0 482 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 LEF1Q9UJU2 399 aaPredicted RBP11.09□□□□□ -0.63
SNX6-207ENST00000556303 AMDHD2Q9Y303 409 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 ALPK2Q86TB3 2170 aa11.09□□□□□ -0.63
SNX6-207ENST00000556303 FN1P02751 2386 aaKnown RBP11.08□□□□□ -0.64
SNX6-207ENST00000556303 NR5A2O00482 541 aa11.08□□□□□ -0.64
SNX6-207ENST00000556303 ABCD4O14678 606 aa11.08□□□□□ -0.64
SNX6-207ENST00000556303 FRS3O43559 492 aa11.08□□□□□ -0.64
SNX6-207ENST00000556303 AKR7A3O95154 331 aa11.08□□□□□ -0.64
SNX6-207ENST00000556303 AHSA1O95433 338 aa11.08□□□□□ -0.64
SNX6-207ENST00000556303 IGHV3-9P01782 118 aa11.08□□□□□ -0.64
SNX6-207ENST00000556303 SOD3P08294 240 aa11.08□□□□□ -0.64
SNX6-207ENST00000556303 PRG2P13727 222 aa11.08□□□□□ -0.64
SNX6-207ENST00000556303 HOXB1P14653 301 aaPredicted RBP11.08□□□□□ -0.64
SNX6-207ENST00000556303 HOXB4P17483 251 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms