RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 FCMRO60667 390 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 HCN1O60741 890 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 SOX30O94993 753 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 H6PDO95479 791 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 OXSR1O95747 527 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-238ENST00000556288 AGR2O95994 175 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 CSTAP01040 98 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 HPNP05981 417 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 STSP08842 583 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 IL6RP08887 468 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-238ENST00000556288 TFPIP10646 304 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 PEPDP12955 493 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 ETFAP13804 333 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 IL7RP16871 459 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 TBXA2RP21731 343 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 ACVR2AP27037 513 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 PTPN6P29350 595 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 SRD5A2P31213 254 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 DCTP40126 519 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 PTGDSP41222 190 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 ATP12AP54707 1039 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 DSCR4P56555 118 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-238ENST00000556288 NUP107P57740 925 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 DSTNP60981 165 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 GNGT1P63211 74 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 PSPHP78330 225 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 LRRC74AQ0VAA2 488 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 CCNIQ14094 377 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 DAG1Q14118 895 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 RCAN2Q14206 197 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 SQLEQ14534 574 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 SF3B4Q15427 424 aaKnown RBP eCLIP4.19□□□□□ -1.74
ATXN3-238ENST00000556288 SYPL1Q16563 259 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 SMN1Q16637 294 aaKnown RBP4.19□□□□□ -1.74
ATXN3-238ENST00000556288 ARHGAP11BQ3KRB8 267 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 PDZK1Q5T2W1 519 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 C1orf185Q5T7R7 199 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 MTFR2Q6P444 385 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 AAGABQ6PD74 315 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 ARSKQ6UWY0 536 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 APOOLQ6UXV4 268 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 B3GNT6Q6ZMB0 384 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 IZUMO1Q8IYV9 350 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 ANKFN1Q8N957 763 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 OR2M3Q8NG83 312 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 ARSGQ96EG1 525 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 DNAJA3Q96EY1 480 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 AURKBQ96GD4 344 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-238ENST00000556288 ZNF764Q96H86 408 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-238ENST00000556288 MAELQ96JY0 434 aaKnown RBP4.19□□□□□ -1.74
ATXN3-238ENST00000556288 CCDC115Q96NT0 180 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 TIMP4Q99727 224 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 DPCDQ9BVM2 203 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-238ENST00000556288 UGT2B28Q9BY64 529 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 RTN4RQ9BZR6 473 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 UCK2Q9BZX2 261 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 KLK15Q9H2R5 256 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 RAD21L1Q9H4I0 556 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 TMEM185BQ9H7F4 350 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 ZDHHC11Q9H8X9 412 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 MTHFD2LQ9H903 347 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-238ENST00000556288 TPT1P8Q9HAU6 139 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 SH2D2AQ9NP31 389 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 ACKR4Q9NPB9 350 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 KCNJ16Q9NPI9 418 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 DUSP22Q9NRW4 184 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 SLC6A13Q9NSD5 602 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 ASB6Q9NWX5 421 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 SPRR3Q9UBC9 169 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 PLEKHB1Q9UF11 243 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-238ENST00000556288 ZNF835Q9Y2P0 537 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 NDUFAF1Q9Y375 327 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 ZNF337Q9Y3M9 751 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 WDR45Q9Y484 360 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 DTNAQ9Y4J8 743 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 PKDREJQ9NTG1 2253 aa4.19□□□□□ -1.74
ATXN3-238ENST00000556288 A0A096LPI6 279 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 A0A1B0GVC2 190 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 GMNCA6NCL1 334 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 SERINC4A6NH21 518 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 HMGN4O00479 90 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 AIM2O14862 343 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 ZNF264O43296 627 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 SCN2BO60939 215 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 WDR1O75083 606 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 INMTO95050 263 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 PSMG1O95456 288 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 SYNGR4O95473 234 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 ACTL6AO96019 429 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 PLGP00747 810 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 LDLRP01130 860 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 IGHG3P01860 377 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 BCHEP06276 602 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 ANXA2P07355 339 aaKnown RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 LINGO3P0C6S8 592 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 UBTFL6P0CB48 400 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-238ENST00000556288 RNF224P0DH78 156 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 UBL4AP11441 157 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 GP1BBP13224 206 aa4.18□□□□□ -1.74
ATXN3-238ENST00000556288 GABRA1P14867 456 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms