RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 BTNL2Q9UIR0 455 aa12.48□□□□□ -0.41
CHMP4BP1-201ENST00000556017 DSPPQ9NZW4 1301 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ZNF503-AS2A6NEH8 195 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 NDUFS8O00217 210 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 LGI1O95970 557 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 IGLV1-44P01699 117 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 GKN3PP0CG01 181 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PRG2P13727 222 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CDH2P19022 906 aaPredicted RBP12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 IL2RGP31785 369 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 MAP2K6P52564 334 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 TUBA1BP68363 451 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 TUBA4AP68366 448 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 HGFACQ04756 655 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 BNIP2Q12982 314 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 MPP2Q14168 576 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 OR7A5Q15622 319 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 TBRG1Q3YBR2 411 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ANXA8L1Q5VT79 327 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 FAM166AQ6J272 317 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ANKRD16Q6P6B7 361 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CREB3L2Q70SY1 520 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 TUBA1AQ71U36 451 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 AAED1Q7RTV5 226 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 EPHX4Q8IUS5 362 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 OR1K1Q8NGR3 316 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SLC38A2Q96QD8 506 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 BPESC1Q9GZL8 116 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PLK3Q9H4B4 646 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PIF1Q9H611 641 aa12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 MTHFD2LQ9H903 347 aaPredicted RBP12.47□□□□□ -0.41
CHMP4BP1-201ENST00000556017 LOC390937A0A1W2PQ73 354 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 TMEM129A0AVI4 362 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 WDR91A4D1P6 747 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 LRP5LA4QPB2 252 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CDHR4A6H8M9 788 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CFAP73A6NFT4 308 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CCDC154A6NI56 674 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 E9PBE3 544 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 FRS3O43559 492 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 LILRA1O75019 489 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 FZD7O75084 574 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 UPK3AO75631 287 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SERPINE1P05121 402 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CELA3BP08861 270 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CECR9P0C854 216 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ZNF23P17027 643 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 GIFP27352 417 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SERPINF1P36955 418 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ABCE1P61221 599 aaKnown RBP12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 UFM1P61960 85 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 VSNL1P62760 191 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 NAAAQ02083 359 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 EFNB3Q15768 340 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 CHI3L2Q15782 390 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 OGFOD2Q6N063 350 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ZNF836Q6ZNA1 936 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 VRK2Q86Y07 508 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 NUDCD3Q8IVD9 361 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ZCCHC24Q8N2G6 241 aaKnown RBP12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 POMGNT2Q8NAT1 580 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 WDR60Q8WVS4 1066 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 C3orf49Q96BT1 292 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 C1orf159Q96HA4 380 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ALKBH3Q96Q83 286 aaPredicted RBP12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PIMREGQ9BSJ6 248 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 KATNB1Q9BVA0 655 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 OBP2BQ9NPH6 170 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 KCNS2Q9ULS6 477 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 RAP2CQ9Y3L5 183 aa12.46□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ARPC4-TTLL3A0A0A6YYG9 625 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 TMEM229AB2RXF0 380 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 FTCDNL1E5RQL4 147 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ZNF432O94892 652 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 WNT11O96014 354 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 IGKV3-15P01624 115 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 GSNP06396 782 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 GPIP06744 558 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 C8BP07358 591 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 OR4A8P0C604 315 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 BMP4P12644 408 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 APEHP13798 732 aaKnown RBP12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 CHI3L1P36222 383 aaPredicted RBP12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 MSMPQ1L6U9 139 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 DPY19L1Q2PZI1 675 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 C3orf36Q3SXR2 165 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 LRRC34Q8IZ02 419 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 CLIP4Q8N3C7 705 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 PNPT1Q8TCS8 783 aaKnown RBP12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 MAGEE2Q8TD90 523 aaPredicted RBP12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 AENQ8WTP8 325 aaKnown RBP12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ZNF837Q96EG3 531 aaPredicted RBP12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 DOK1Q99704 481 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 PTDSS2Q9BVG9 487 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 NUF2Q9BZD4 464 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ROPN1BQ9BZX4 212 aaPredicted RBP12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 MEAF6Q9HAF1 191 aa12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ROPN1Q9HAT0 212 aaPredicted RBP12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 PNPOQ9NVS9 261 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms