RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ARSGQ96EG1 525 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 SCMH1Q96GD3 660 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 BMFQ96LC9 184 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 HSPA12BQ96MM6 686 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 OR14A2Q96R54 314 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CITED4Q96RK1 184 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 GSDMCQ9BYG8 508 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 GHITMQ9H3K2 345 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 UCKL1Q9NWZ5 548 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 EMC3Q9P0I2 261 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 SPATA2Q9UM82 520 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 ZNF337Q9Y3M9 751 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 OR10H1Q9Y4A9 318 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 BLACEA4D250 179 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.42□□□□□ -1.38
TDP1-213ENST00000555880 ERVH48-1M5A8F1 160 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 CTDSPLO15194 276 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 ECDO95905 644 aaPredicted RBP6.42□□□□□ -1.38
TDP1-213ENST00000555880 CSTAP01040 98 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 TFP02787 698 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 NGFRP08138 427 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 TACSTD2P09758 323 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 ATF1P18846 271 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 PRPS1P60891 318 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 GPLD1P80108 840 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 DGCR2P98153 550 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 PSG6Q00889 435 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 PLAURQ03405 335 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 C19orf57Q0VDD7 668 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 DBPQ10586 325 aaPredicted RBP6.42□□□□□ -1.38
TDP1-213ENST00000555880 HYAL1Q12794 435 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 SNTB2Q13425 540 aaKnown RBP6.42□□□□□ -1.38
TDP1-213ENST00000555880 DYRK1AQ13627 763 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 FGFBP1Q14512 234 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 ZNF141Q15928 474 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 FAM69AQ5T7M9 428 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 LAMTOR1Q6IAA8 161 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 KIRREL2Q6UWL6 708 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 LINC00114Q6XXX2 140 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 Q6ZSR6 202 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 LINGO2Q7L985 606 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 FAM220AQ7Z4H9 259 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 FGD2Q7Z6J4 655 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 ZNF440Q8IYI8 595 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 ARL14Q8N4G2 192 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 RFLNBQ8N5W9 214 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 OR8H1Q8NGG4 311 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 OR51L1Q8NGJ5 315 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 OR9A4Q8NGU2 314 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 OR56B4Q8NH76 319 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 LGALS14Q8TCE9 139 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 ADAMTS18Q8TE60 1221 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 SMIM4Q8WVI0 70 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 HOXB13Q92826 284 aaPredicted RBP6.42□□□□□ -1.38
TDP1-213ENST00000555880 NECTIN4Q96NY8 510 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 OCSTAMPQ9BR26 566 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 MRI1Q9BV20 369 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 SPRTNQ9H040 489 aaPredicted RBP6.42□□□□□ -1.38
TDP1-213ENST00000555880 SLITRK2Q9H156 845 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 ZNF275Q9NSD4 429 aaPredicted RBP6.42□□□□□ -1.38
TDP1-213ENST00000555880 STARD5Q9NSY2 213 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 NCDNQ9UBB6 729 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 MGAT4AQ9UM21 535 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 AK6Q9Y3D8 172 aaKnown RBP6.42□□□□□ -1.38
TDP1-213ENST00000555880 LRP4O75096 1905 aa6.42□□□□□ -1.38
TDP1-213ENST00000555880 COL4A2P08572 1712 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 A0A087WUJ7 227 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 TRABD2BA6NFA1 517 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 EPOPA6NHQ4 379 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ELOA3DA6NLF2 546 aaPredicted RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 MCIDASD6RGH6 385 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 CLDN4O14493 209 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ARPC3O15145 178 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 LINC01565O15544 149 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 HYAL3O43820 417 aaPredicted RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 EGFP01133 1207 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 MT-ND4P03905 459 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 TYRP1P17643 537 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 SPI1P17947 270 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 SRMP19623 302 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 MAPK3P27361 379 aaPredicted RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 GRK6P43250 576 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 RABIFP47224 123 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 LSSP48449 732 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 TPMTP51580 245 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 HCCSP53701 268 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 UBE2IP63279 158 aaKnown RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 FHL1Q13642 323 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 IL10RAQ13651 578 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ZNF267Q14586 743 aaPredicted RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 ISXQ2M1V0 245 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ELOA3BQ3SY89 546 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 SLC6A19Q695T7 634 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 BTN2A1Q7KYR7 527 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 TAF8Q7Z7C8 310 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 JAZF1Q86VZ6 243 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 SLC35F3Q8IY50 421 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ZNF595Q8IYB9 648 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 FAM109AQ8N4B1 249 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 EID2Q8N6I1 236 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms