RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 CHCHD10Q8WYQ3 142 aaPredicted RBP3.19□□□□□ -1.9
KTN1-222ENST00000555506 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.19□□□□□ -1.9
KTN1-222ENST00000555506 NUS1Q96E22 293 aa3.19□□□□□ -1.9
KTN1-222ENST00000555506 CNOT6LQ96LI5 555 aaKnown RBP3.19□□□□□ -1.9
KTN1-222ENST00000555506 C12orf42Q96LP6 360 aa3.19□□□□□ -1.9
KTN1-222ENST00000555506 ZNF641Q96N77 438 aaPredicted RBP3.19□□□□□ -1.9
KTN1-222ENST00000555506 FMO2Q99518 471 aa3.19□□□□□ -1.9
KTN1-222ENST00000555506 GPR61Q9BZJ8 451 aa3.19□□□□□ -1.9
KTN1-222ENST00000555506 PPA2Q9H2U2 334 aa3.19□□□□□ -1.9
KTN1-222ENST00000555506 FOLH1BQ9HBA9 442 aa3.19□□□□□ -1.9
KTN1-222ENST00000555506 PEX16Q9Y5Y5 336 aa3.19□□□□□ -1.9
KTN1-222ENST00000555506 IGKV1D-8A0A087WSZ0 117 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 IGHV1OR21-1A0A087WYE8 117 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 LOC110117498-PIK3R3F6TDL0 507 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 GFYI3L273 518 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 TNFSF11O14788 317 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 ERLIN1O75477 346 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 SRSF10O75494 262 aaKnown RBP3.18□□□□□ -1.9
KTN1-222ENST00000555506 UPK3AO75631 287 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 HSPB1P04792 205 aaKnown RBP3.18□□□□□ -1.9
KTN1-222ENST00000555506 CASP14P31944 242 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 RPS8P62241 208 aaKnown RBP3.18□□□□□ -1.9
KTN1-222ENST00000555506 SCRN3Q0VDG4 424 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 MRPL28Q13084 256 aaKnown RBP3.18□□□□□ -1.9
KTN1-222ENST00000555506 PLD1Q13393 1074 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 OR5I1Q13606 314 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 CUL2Q13617 745 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 PARP15Q460N3 678 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 SAMD4BQ5PRF9 694 aaKnown RBP3.18□□□□□ -1.9
KTN1-222ENST00000555506 KDM7AQ6ZMT4 941 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 PAQR7Q86WK9 346 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 ECHDC2Q86YB7 292 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 RDH10Q8IZV5 341 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 LINC00612Q8N6U2 182 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 OR2L3Q8NG85 312 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 OR1L6Q8NGR2 347 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 KCNG3Q8TAE7 436 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 OR1E3Q8WZA6 343 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 IFT74Q96LB3 600 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 CNN2Q99439 309 aaKnown RBP3.18□□□□□ -1.9
KTN1-222ENST00000555506 MRPL45Q9BRJ2 306 aaKnown RBP3.18□□□□□ -1.9
KTN1-222ENST00000555506 SELENOIQ9C0D9 397 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 VPS37BQ9H9H4 285 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 NT5MQ9NPB1 228 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 TNFRSF19Q9NS68 423 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 SLC2A8Q9NY64 477 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 TMEM9Q9P0T7 183 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 SLC7A8Q9UHI5 535 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 IKZF2Q9UKS7 526 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 UGT2A1Q9Y4X1 527 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 V9GY05 133 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 TTC21BQ7Z4L5 1316 aa3.18□□□□□ -1.9
KTN1-222ENST00000555506 COL2A1P02458 1487 aaPredicted RBP3.18□□□□□ -1.9
KTN1-222ENST00000555506 A0A1W2PPV9 198 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 CCDC182A6NF36 153 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 EPOPA6NHQ4 379 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 SGK1O00141 431 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 MBTPS2O43462 519 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 MCF2P10911 925 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 PRMT2P55345 433 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 ZNF45Q02386 682 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 ZNF77Q15935 545 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 KYAT1Q16773 422 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 DGUOKQ16854 277 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 MICBQ29980 383 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 BCL7AQ4VC05 210 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 SPINK14Q6IE38 97 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 METAP1DQ6UB28 335 aaPredicted RBP3.17□□□□□ -1.9
KTN1-222ENST00000555506 FAM220AQ7Z4H9 259 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 TMEM179BQ7Z7N9 219 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 ZBED8Q8IZ13 594 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 TMEM252Q8N6L7 170 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 CCDC71LQ8N9Z2 235 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 OR52I1Q8NGK6 324 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 FGF11Q92914 225 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 KCNA7Q96RP8 456 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 HIST1H4GQ99525 98 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 RIOK1Q9BRS2 568 aaKnown RBP3.17□□□□□ -1.9
KTN1-222ENST00000555506 NICN1Q9BSH3 213 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 MARCH5Q9NX47 278 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 KLHL28Q9NXS3 571 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 HOXC10Q9NYD6 342 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 TREM2Q9NZC2 230 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 PISDQ9UG56 409 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 KIF25Q9UIL4 384 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 ABCG2Q9UNQ0 655 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 KCNIP3Q9Y2W7 256 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 NSD2O96028 1365 aa3.17□□□□□ -1.9
KTN1-222ENST00000555506 IGHV3OR16-13A0A075B7E8 117 aa3.16□□□□□ -1.9
KTN1-222ENST00000555506 HEATR9A2RTY3 570 aa3.16□□□□□ -1.9
KTN1-222ENST00000555506 OR5B21A6NL26 309 aa3.16□□□□□ -1.9
KTN1-222ENST00000555506 ZFP92A6NM28 416 aa3.16□□□□□ -1.9
KTN1-222ENST00000555506 E9PBE3 544 aa3.16□□□□□ -1.9
KTN1-222ENST00000555506 TOM1O60784 492 aa3.16□□□□□ -1.9
KTN1-222ENST00000555506 SNAPINO95295 136 aa3.16□□□□□ -1.9
KTN1-222ENST00000555506 CST1P01037 141 aa3.16□□□□□ -1.9
KTN1-222ENST00000555506 MMP1P03956 469 aa3.16□□□□□ -1.9
KTN1-222ENST00000555506 KLK3P07288 261 aaPredicted RBP3.16□□□□□ -1.9
KTN1-222ENST00000555506 CRYGBP07316 175 aa3.16□□□□□ -1.9
KTN1-222ENST00000555506 TOP1P11387 765 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms