RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 CCDC80Q76M96 950 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 COMTD1Q86VU5 262 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 MICU2Q8IYU8 434 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 STEAP2Q8NFT2 490 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 LZICQ8WZA0 190 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 KISS1RQ969F8 398 aaPredicted RBP10.75□□□□□ -0.69
SRP54-206ENST00000555317 ZC3HAV1LQ96H79 300 aaKnown RBP10.75□□□□□ -0.69
SRP54-206ENST00000555317 ZNF583Q96ND8 569 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 HDHD5Q9BXW7 423 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 MYLK2Q9H1R3 596 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 PARPBPQ9NWS1 579 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 EDARQ9UNE0 448 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 MAP1AP78559 2803 aaPredicted RBP10.75□□□□□ -0.69
SRP54-206ENST00000555317 TRAV36DV7A0A075B6V5 113 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 A0A0B4J2E0 115 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 A0A1B0GX12 115 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 AQP7P3A6NL99 342 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 CPSF4LA6NMK7 179 aaKnown RBP10.74□□□□□ -0.69
SRP54-206ENST00000555317 GMNNO75496 209 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 CTAG2O75638 210 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 VAMP5O95183 116 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 ADAP00813 363 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 CCKARP32238 428 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 SLC16A1P53985 500 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 LIPEQ05469 1076 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 MFSD13AQ14CX5 517 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 P2RY6Q15077 328 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 GKAP1Q5VSY0 366 aaPredicted RBP10.74□□□□□ -0.69
SRP54-206ENST00000555317 ANKRD34AQ69YU3 496 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 ZNF613Q6PF04 617 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 STAC2Q6ZMT1 411 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 Q6ZT83 130 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 CXorf67Q86X51 503 aaPredicted RBP10.74□□□□□ -0.69
SRP54-206ENST00000555317 C10orf53Q8N6V4 93 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 TMEM99Q8N816 258 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 GPR32P1Q8NGA4 272 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 OR6T1Q8NGN1 323 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 MFSD8Q8NHS3 518 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 TPD52L3Q96J77 140 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 WFIKKN1Q96NZ8 548 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 KCTD14Q9BQ13 255 aaPredicted RBP10.74□□□□□ -0.69
SRP54-206ENST00000555317 SF3B5Q9BWJ5 86 aaKnown RBP10.74□□□□□ -0.69
SRP54-206ENST00000555317 PRR14Q9BWN1 585 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 ACTR6Q9GZN1 396 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 ALG2Q9H553 416 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 SPAG4Q9NPE6 437 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 RASSF1Q9NS23 344 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 CMTM6Q9NX76 183 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 GPR52Q9Y2T5 361 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 SH3GLB1Q9Y371 365 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 CSMD1Q96PZ7 3565 aa10.74□□□□□ -0.69
SRP54-206ENST00000555317 TRAPPC13A5PLN9 417 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 ZNF716A6NP11 495 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 ZNF814B7Z6K7 855 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 CHP2O43745 196 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 NPIPB7O75200 414 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 GCM2O75603 506 aaPredicted RBP10.73□□□□□ -0.69
SRP54-206ENST00000555317 CNOT4O95628 575 aaKnown RBP10.73□□□□□ -0.69
SRP54-206ENST00000555317 PSMB1P20618 241 aaKnown RBP10.73□□□□□ -0.69
SRP54-206ENST00000555317 IFNA8P32881 189 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 CDH12P55289 794 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 TAS2R41P59536 307 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 PSME3P61289 254 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 MXRA7P84157 204 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 H3F3AP84243 136 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 CYBRD1Q53TN4 286 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 ENTPD8Q5MY95 495 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 FAM69AQ5T7M9 428 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 ALKBH2Q6NS38 261 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 DEF8Q6ZN54 512 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 BHLHA15Q7RTS1 189 aaPredicted RBP10.73□□□□□ -0.69
SRP54-206ENST00000555317 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.73□□□□□ -0.69
SRP54-206ENST00000555317 CDH24Q86UP0 819 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 CARM1Q86X55 608 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 SLC15A3Q8IY34 581 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 GABRG1Q8N1C3 465 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 OR9K2Q8NGE7 335 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 KTI12Q96EK9 354 aaPredicted RBP10.73□□□□□ -0.69
SRP54-206ENST00000555317 CCT8L2Q96SF2 557 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 USB1Q9BQ65 265 aaKnown RBP10.73□□□□□ -0.69
SRP54-206ENST00000555317 ASPNQ9BXN1 380 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 RSPO3Q9BXY4 272 aaPredicted RBP10.73□□□□□ -0.69
SRP54-206ENST00000555317 OR10A4Q9H209 315 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 ADA2Q9NZK5 511 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 UPB1Q9UBR1 384 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 ING1Q9UK53 422 aaPredicted RBP10.73□□□□□ -0.69
SRP54-206ENST00000555317 USP22Q9UPT9 525 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 RASD1Q9Y272 281 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 FLVCR1Q9Y5Y0 555 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 ROS1P08922 2347 aa10.73□□□□□ -0.69
SRP54-206ENST00000555317 PDZD2O15018 2839 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 A0A087WUJ7 227 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 CXCR6O00574 342 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 NME4O00746 187 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 RAMP1O60894 148 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 KRT33AO76009 404 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 ZNF682O95780 498 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 NQO1P15559 274 aaKnown RBP10.72□□□□□ -0.69
SRP54-206ENST00000555317 KDELR2P33947 212 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 MNAT1P51948 309 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms