RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 POMGNT2Q8NAT1 580 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 ZNF671Q8TAW3 534 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 ARL11Q969Q4 196 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 ZNF471Q9BX82 626 aaPredicted RBP14.43□□□□□ -0.1
SYNE3-203ENST00000554873 ATXN7L1Q9ULK2 861 aaPredicted RBP14.43□□□□□ -0.1
SYNE3-203ENST00000554873 TRAV1-2A0A0B4J238 106 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 HMGN4O00479 90 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 TBX6O95947 436 aaPredicted RBP14.43□□□□□ -0.1
SYNE3-203ENST00000554873 UCHL1P09936 223 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 HPGDP15428 266 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 XPAP23025 273 aaPredicted RBP14.43□□□□□ -0.1
SYNE3-203ENST00000554873 CLEC12AQ5QGZ9 265 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 OR1J4Q8NGS1 313 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 RNASE11Q8TAA1 199 aaKnown RBP14.43□□□□□ -0.1
SYNE3-203ENST00000554873 TNFAIP8L1Q8WVP5 186 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 OR5P2Q8WZ92 322 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 IL17FQ96PD4 163 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 TREM1Q9NP99 234 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 MAN2C1Q9NTJ4 1040 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 DZANK1Q9NVP4 752 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 C2orf42Q9NWW7 574 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 TAS2R10Q9NYW0 307 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 PLPP1O14494 284 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 OR2F2O95006 317 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 NDUFB7P17568 137 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 AHRP35869 848 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 SRSF3P84103 164 aaKnown RBP14.42□□□□□ -0.1
SYNE3-203ENST00000554873 TLE2Q04725 743 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 HSPB3Q12988 150 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 OR2F1Q13607 317 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 ACSM3Q53FZ2 586 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 DPPA4Q7L190 304 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 BBS1Q8NFJ9 593 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 AKR7LQ8NHP1 331 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 LGALS14Q8TCE9 139 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 TM4SF18Q96CE8 201 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 OR51I1Q9H343 314 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 XKR8Q9H6D3 395 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 H2AFY2Q9P0M6 372 aaPredicted RBP14.42□□□□□ -0.1
SYNE3-203ENST00000554873 LAMA2P24043 3122 aaKnown RBP14.42□□□□□ -0.1
SYNE3-203ENST00000554873 PRAMEF27A3QJZ7 478 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 ZNF879B4DU55 563 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 MCIDASD6RGH6 385 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 SURF4O15260 269 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 FLRT2O43155 660 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 RDH16O75452 317 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 ELFN1P0C7U0 828 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 POU3F4P49335 361 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 UBE2MP61081 183 aaKnown RBP14.42□□□□□ -0.1
SYNE3-203ENST00000554873 MUC20Q8N307 709 aaPredicted RBP14.42□□□□□ -0.1
SYNE3-203ENST00000554873 OR51G2Q8NGK0 314 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 HIST1H2BAQ96A08 127 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 ZNF689Q96CS4 500 aaPredicted RBP14.42□□□□□ -0.1
SYNE3-203ENST00000554873 C14orf79Q96F83 325 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 ZNF558Q96NG5 402 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 TEX12Q9BXU0 123 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 KCNK12Q9HB15 430 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 SIRT3Q9NTG7 399 aaPredicted RBP14.42□□□□□ -0.1
SYNE3-203ENST00000554873 UQCC1Q9NVA1 299 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 PPP4R1LQ9P1A2 415 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 MTCL1Q9Y4B5 1905 aaKnown RBP14.42□□□□□ -0.1
SYNE3-203ENST00000554873 CH25HO95992 272 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 RB1P06400 928 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 APEHP13798 732 aaKnown RBP14.42□□□□□ -0.1
SYNE3-203ENST00000554873 ZNF14P17017 642 aaPredicted RBP14.42□□□□□ -0.1
SYNE3-203ENST00000554873 CSNK1EP49674 416 aaKnown RBP14.42□□□□□ -0.1
SYNE3-203ENST00000554873 TRAPPC5Q8IUR0 188 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 OSTF1Q92882 214 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 TIMP4Q99727 224 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 OR2AG1Q9H205 316 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 TMEM138Q9NPI0 162 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 MED17Q9NVC6 651 aa14.42□□□□□ -0.1
SYNE3-203ENST00000554873 LAMA3Q16787 3333 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 TMEM272A0A1B0GTI8 110 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 TSPAN11A1L157 253 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 M0R3H8 397 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 FGF16O43320 207 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 OIP5O43482 229 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 OR2T1O43869 369 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 DCTDP32321 178 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 NUBP1P53384 320 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 SP3Q02447 781 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 SYPL1Q16563 259 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 SLC29A4Q7RTT9 530 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 OLIG3Q7RTU3 272 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 MEX3DQ86XN8 651 aaKnown RBP14.41□□□□□ -0.1
SYNE3-203ENST00000554873 ARRDC1Q8N5I2 433 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 VN1R2Q8NFZ6 395 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 F2RL3Q96RI0 385 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 NRTNQ99748 197 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 SSX3Q99909 188 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 KLHL31Q9H511 634 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 KLF15Q9UIH9 416 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 PLAGL1Q9UM63 463 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 K7ESM1 405 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 PPIHO43447 177 aaKnown RBP14.41□□□□□ -0.1
SYNE3-203ENST00000554873 TGM5O43548 720 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 NRG3P56975 720 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 TMEM200AQ86VY9 491 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 FAM129CQ86XR2 697 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms