RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 PRPS2P11908 318 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 HSD3B1P14060 373 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 DDCP20711 480 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 PAX7P23759 505 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 TYK2P29597 1187 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 SSTR1P30872 391 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 GSTM5P46439 218 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 PRIM2P49643 509 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 PPOXP50336 477 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 PRPS1P60891 318 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 TGFBR3Q03167 851 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 FOXF1Q12946 379 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 FOXI1Q12951 378 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 TRAF3Q13114 568 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 FASTKD3Q14CZ7 662 aaKnown RBP4.17□□□□□ -1.74
ATXN3-229ENST00000554672 TRADDQ15628 312 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 CT83Q5H943 113 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 FAHD2BQ6P2I3 314 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-229ENST00000554672 KLC3Q6P597 504 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 TMEM107Q6UX40 140 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 TMPPEQ6ZT21 453 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 C3orf62Q6ZUJ4 267 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 SPATA19Q7Z5L4 167 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 MTERF4Q7Z6M4 381 aaKnown RBP4.17□□□□□ -1.74
ATXN3-229ENST00000554672 CMC1Q7Z7K0 106 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 CTAGE3PQ8IX95 158 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 C17orf78Q8N4C9 275 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 PTGR2Q8N8N7 351 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-229ENST00000554672 GATSQ8NAP1 163 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 C1orf162Q8NEQ5 155 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-229ENST00000554672 OR4F6Q8NGB9 312 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 CEP70Q8NHQ1 597 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 C16orf78Q8WTQ4 265 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 WDR60Q8WVS4 1066 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 LINC00476Q8WZB0 136 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 PIK3R3Q92569 461 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 FAHD2AQ96GK7 314 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 MRGPRX4Q96LA9 322 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 ZNF300Q96RE9 604 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-229ENST00000554672 DOK1Q99704 481 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 HOXD1Q9GZZ0 328 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 GLIPR2Q9H4G4 154 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 COQ10BQ9H8M1 238 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 NTN4Q9HB63 628 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 SLC17A5Q9NRA2 495 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 CA10Q9NS85 328 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 FARSBQ9NSD9 589 aaKnown RBP4.17□□□□□ -1.74
ATXN3-229ENST00000554672 DDX28Q9NUL7 540 aaKnown RBP4.17□□□□□ -1.74
ATXN3-229ENST00000554672 MED29Q9NX70 200 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 CPSF2Q9P2I0 782 aaKnown RBP4.17□□□□□ -1.74
ATXN3-229ENST00000554672 TMCO1Q9UM00 188 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 MOKQ9UQ07 419 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 AMDHD2Q9Y303 409 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 NOSIPQ9Y314 301 aaKnown RBP4.17□□□□□ -1.74
ATXN3-229ENST00000554672 PRR14LQ5THK1 2151 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 CADP27708 2225 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 TCRBV9S1A1TA0A576 114 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 UNC119BA6NIH7 251 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 MARCH11A6NNE9 402 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 B5MCH6 92 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 H3BNH8 94 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 PDLIM1O00151 329 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 GTPBP1O00178 669 aaKnown RBP4.16□□□□□ -1.74
ATXN3-229ENST00000554672 MANBAO00462 879 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 PCDH7O60245 1069 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 SMIM24O75264 130 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 ULK1O75385 1050 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 SEC31AO94979 1220 aaKnown RBP4.16□□□□□ -1.74
ATXN3-229ENST00000554672 KCNK2O95069 426 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 KLHL2O95198 593 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 NUDT14O95848 222 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 OTCP00480 354 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 CRYAAP02489 173 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 KRT6AP02538 564 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 KRT6BP04259 564 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 MSMBP08118 114 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 GSTA2P09210 222 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 RBP1P09455 135 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 ANPEPP15144 967 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 MAP3K8P41279 467 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 SLC1A3P43003 542 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 KRT6CP48668 564 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 P2RX1P51575 399 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 SUMO3P55854 103 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-229ENST00000554672 LGALS4P56470 323 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 TMEM33P57088 247 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 UBA52P62987 128 aaKnown RBP4.16□□□□□ -1.74
ATXN3-229ENST00000554672 CSNK2A1P68400 391 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-229ENST00000554672 RAE1P78406 368 aaKnown RBP4.16□□□□□ -1.74
ATXN3-229ENST00000554672 ACSM2AQ08AH3 577 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 C2orf80Q0P641 193 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 SELENBP1Q13228 472 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 CCNIQ14094 377 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 TRIP10Q15642 601 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 ADIPOQQ15848 244 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 SPIN4Q56A73 249 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 SLC25A53Q5H9E4 307 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 ACSM2BQ68CK6 577 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 ZCCHC12Q6PEW1 402 aa4.16□□□□□ -1.74
ATXN3-229ENST00000554672 RBMS3Q6XE24 437 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms