RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 OR52I1Q8NGK6 324 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 OR9A4Q8NGU2 314 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 PCNPQ8WW12 178 aaKnown RBP12.99□□□□□ -0.33
VTI1B-204ENST00000554659 DUS3LQ96G46 650 aaKnown RBP12.99□□□□□ -0.33
VTI1B-204ENST00000554659 WASH6PQ9NQA3 447 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 STARD5Q9NSY2 213 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 PLEKHM1Q9Y4G2 1056 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 A0A1W2PPV4 95 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 BMP1P13497 986 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 APEX1P27695 318 aaKnown RBP12.98□□□□□ -0.33
VTI1B-204ENST00000554659 RPS15P62841 145 aaKnown RBP12.98□□□□□ -0.33
VTI1B-204ENST00000554659 REEP5Q00765 189 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 TBPL2Q6SJ96 375 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 ABHD4Q8TB40 342 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 GPR78Q96P69 363 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 ADOQ96SZ5 270 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 EMC7Q9NPA0 242 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 CA5BQ9Y2D0 317 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.98□□□□□ -0.33
VTI1B-204ENST00000554659 SULT2B1O00204 365 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 DPM1O60762 260 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 STK17BO94768 372 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 NUDT1P36639 197 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 CSNK1A1P48729 337 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 PPT1P50897 306 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 OR2A12Q8NGT7 310 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 OR6F1Q8NGZ6 308 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 OR52N1Q8NH53 320 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 GHSRQ92847 366 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 INSM2Q96T92 566 aaPredicted RBP12.98□□□□□ -0.33
VTI1B-204ENST00000554659 MS4A8Q9BY19 250 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 SRPK3Q9UPE1 567 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 MYH4Q9Y623 1939 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 FABP7O15540 132 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 FUCA1P04066 466 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 FPR3P25089 353 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 EMP2P54851 167 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 TAS2R46P59540 309 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 FAM160A2Q8N612 972 aaPredicted RBP12.98□□□□□ -0.33
VTI1B-204ENST00000554659 SLC25A31Q9H0C2 315 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 PLEK2Q9NYT0 353 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 FTSJ1Q9UET6 329 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 RFXAPO00287 272 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 TIMP1P01033 207 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 TRAPPC2P0DI81 140 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 TRAPPC2BP0DI82 140 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 NFYAP23511 347 aaPredicted RBP12.98□□□□□ -0.33
VTI1B-204ENST00000554659 ISL1P61371 349 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 RPE65Q16518 533 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 OR7E24Q6IFN5 339 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 DLEU7Q6UYE1 221 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 MRPL21Q7Z2W9 205 aaKnown RBP12.98□□□□□ -0.33
VTI1B-204ENST00000554659 LGALS14Q8TCE9 139 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 PHYHIPQ92561 330 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 SENP5Q96HI0 755 aaPredicted RBP12.98□□□□□ -0.33
VTI1B-204ENST00000554659 TEX37Q96LM6 180 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 CDCA3Q99618 268 aaPredicted RBP12.98□□□□□ -0.33
VTI1B-204ENST00000554659 HCAR1Q9BXC0 346 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 NMNAT2Q9BZQ4 307 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 CAMK2AQ9UQM7 478 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 TNFRSF10AO00220 468 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 ITGB2P05107 769 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 GABRR1P24046 479 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 DDOSTP39656 456 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 PLGLAQ15195 96 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 LRRC26Q2I0M4 334 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 C11orf91Q3C1V1 193 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 TMEM41BQ5BJD5 291 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 COX20Q5RI15 118 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 CREB3L2Q70SY1 520 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 TECPR1Q7Z6L1 1165 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 SLC43A2Q8N370 569 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 DUSP19Q8WTR2 217 aa12.98□□□□□ -0.33
VTI1B-204ENST00000554659 SLC22A23A1A5C7 686 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 SLC9B1P1A6NJY1 282 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 TCRBP04435 133 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 SLC22A6Q4U2R8 563 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 VASNQ6EMK4 673 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 OR4K15Q8NH41 348 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 CHTF18Q8WVB6 975 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 CRB3Q9BUF7 120 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 AMBRA1Q9C0C7 1298 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 EPHX3Q9H6B9 360 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 PUS1Q9Y606 427 aaKnown RBP eCLIP12.97□□□□□ -0.33
VTI1B-204ENST00000554659 SULT1B1O43704 296 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 F3P13726 295 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 CST5P28325 142 aaPredicted RBP12.97□□□□□ -0.33
VTI1B-204ENST00000554659 SHC1P29353 583 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 CLDN6P56747 220 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 RAB38P57729 211 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 CLDN2P57739 230 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 UBE2KP61086 200 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 CTBSQ01459 385 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 MPEG1Q2M385 716 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 Q499Y3 187 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 NDUFAF7Q7L592 441 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 MED20Q9H944 212 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 SIDT1Q9NXL6 827 aaKnown RBP12.97□□□□□ -0.33
VTI1B-204ENST00000554659 CPNE7Q9UBL6 633 aa12.97□□□□□ -0.33
VTI1B-204ENST00000554659 ACOD1A6NK06 481 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms