RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SEC14L5O43304 696 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 ATP8B1O43520 1251 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 KIAA0513O60268 411 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 SS18L1O75177 396 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-228ENST00000554592 FGGP02679 453 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 CSF3P09919 207 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 CPMP14384 443 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 NCF1P14598 390 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-228ENST00000554592 PORP16435 677 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-228ENST00000554592 EPORP19235 508 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 TCEA1P23193 301 aaKnown RBP4.27□□□□□ -1.73
ATXN3-228ENST00000554592 IL32P24001 234 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 ATP5F1P24539 256 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-228ENST00000554592 TTKP33981 857 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 BSGP35613 385 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 COMPP49747 757 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-228ENST00000554592 CLDN20P56880 219 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 PSPHP78330 225 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 IRX1P78414 480 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-228ENST00000554592 MRPS22P82650 360 aaKnown RBP4.27□□□□□ -1.73
ATXN3-228ENST00000554592 BSPH1Q075Z2 132 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 TAB1Q15750 504 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 TBCEQ15813 527 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-228ENST00000554592 NNATQ16517 81 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 FAM174BQ3ZCQ3 159 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 MIDNQ504T8 468 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 MTX3Q5HYI7 312 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 RAET1LQ5VY80 246 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 TMEM268Q5VZI3 342 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 OR52E8Q6IFG1 317 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 MZT2BQ6NZ67 158 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 RAD9BQ6WBX8 426 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 FAM57BQ71RH2 274 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 SSX8Q7RTT4 187 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 PRSS45Q7RTY3 260 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 GLCCI1Q86VQ1 547 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-228ENST00000554592 C3orf56Q8N813 242 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 NAT8LQ8N9F0 302 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 DNAAF1Q8NEP3 725 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 KBTBD8Q8NFY9 601 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 HUS1BQ8NHY5 278 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 KIF18AQ8NI77 898 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 METTL6Q8TCB7 284 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 C10orf105Q8TEF2 133 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 SCARB1Q8WTV0 552 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 ANKRD49Q8WVL7 239 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 TMBIM1Q969X1 311 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 ESAMQ96AP7 390 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 CERS2Q96G23 380 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 TMEM79Q9BSE2 394 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 IFT27Q9BW83 186 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 DERL2Q9GZP9 239 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 DDX47Q9H0S4 455 aaKnown RBP4.27□□□□□ -1.73
ATXN3-228ENST00000554592 DSN1Q9H410 356 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 PTGES2Q9H7Z7 377 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 EML4Q9HC35 981 aaKnown RBP4.27□□□□□ -1.73
ATXN3-228ENST00000554592 SDHAF3Q9NRP4 125 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 CBLN4Q9NTU7 201 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 PAQR5Q9NXK6 330 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-228ENST00000554592 GRHL1Q9NZI5 618 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 HSPB7Q9UBY9 170 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 BCAP29Q9UHQ4 241 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 PYCARDQ9ULZ3 195 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 CLEC4AQ9UMR7 237 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 ANK2Q01484 3957 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 DSCAMO60469 2012 aa4.27□□□□□ -1.73
ATXN3-228ENST00000554592 ROS1P08922 2347 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 TRBV5-7A0A0A0MS05 114 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 TEX13CA0A0J9YWL9 993 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 DPPA5A6NC42 116 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 SHISA9B4DS77 424 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 SLCO1B7G3V0H7 640 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 RHODO00212 210 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 NDUFS8O00217 210 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 LDLRAD4O15165 306 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 ZSCAN12O43309 604 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 TSPAN2O60636 221 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 RAMP1O60894 148 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 EEDO75530 441 aaKnown RBP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 GCM2O75603 506 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 BCAS2O75934 225 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 SYNGR4O95473 234 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 TGFAP01135 160 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 CLEC3BP05452 202 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 TUBBP07437 444 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 PABPC4LP0CB38 370 aaKnown RBP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 ITGA2P17301 1181 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 CSNK2A2P19784 350 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 PTNP21246 168 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 KRT20P35900 424 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 SRP14P37108 136 aaKnown RBP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 SLC6A8P48029 635 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 EFNA4P52798 201 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 PNLIPRP2P54317 469 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 GAS1P54826 345 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 CDH11P55287 796 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 TAS2R39P59534 338 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 PHEXP78562 749 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 ILF2Q12905 390 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms