RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CYTH1Q15438 398 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 TAB1Q15750 504 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 HLA-BQ31612 363 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 CYBRD1Q53TN4 286 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 VWA2Q5GFL6 755 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 ACER2Q5QJU3 275 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 SEL1L2Q5TEA6 688 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 GPR107Q5VW38 600 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 WSCD1Q658N2 575 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 SPECC1LQ69YQ0 1117 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 SLC25A47Q6Q0C1 308 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 SASS6Q6UVJ0 657 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 MOB2Q70IA6 237 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 ASCL5Q7RTU5 278 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 ERICH1Q86X53 443 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 NUDCD3Q8IVD9 361 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 CD302Q8IX05 232 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 BPIFB2Q8N4F0 458 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 PQLC3Q8N755 202 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 ACOT4Q8N9L9 421 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 FBXO36Q8NEA4 188 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 OR4F6Q8NGB9 312 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 OR5T2Q8NGG2 359 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 OR52H1Q8NGJ2 320 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 OR51L1Q8NGJ5 315 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 OR9G4Q8NGQ1 327 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 OR13C9Q8NGT0 318 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 OR2L2Q8NH16 312 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 OR5B3Q8NH48 314 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 CLHC1Q8NHS4 586 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 RFESDQ8TAC1 157 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 MARCH1Q8TCQ1 289 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 MAPK15Q8TD08 544 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 DTX3LQ8TDB6 740 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 ACMSDQ8TDX5 336 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 ARNTL2Q8WYA1 636 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 BADQ92934 168 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 ECHDC3Q96DC8 303 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 CCDC126Q96EE4 140 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 CYYR1Q96J86 154 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 NSMCE3Q96MG7 304 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 FAM218AQ96MZ4 157 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 OR5B2Q96R09 309 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 NAPGQ99747 312 aaPredicted RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 FAM173AQ9BQD7 235 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 LZTS2Q9BRK4 669 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 FEM1AQ9BSK4 669 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 LRRC61Q9BV99 259 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 FRMD8P1Q9BZ68 369 aaPredicted RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 UPF3AQ9H1J1 476 aaKnown RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 RBKSQ9H477 322 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 ANKRD19PQ9H560 264 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 NT5DC2Q9H857 520 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 SP140LQ9H930 580 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 WDR41Q9HAD4 459 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 MRPS30Q9NP92 439 aaKnown RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 MYOZ2Q9NPC6 264 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 ZC4H2Q9NQZ6 224 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 SPHK2Q9NRA0 654 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 STX18Q9P2W9 335 aaKnown RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 GALPQ9UBC7 116 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 CD300AQ9UGN4 299 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 MGAT4AQ9UM21 535 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 BARX2Q9UMQ3 279 aaPredicted RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 COPS3Q9UNS2 423 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 PPP1R3CQ9UQK1 317 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 NTNG1Q9Y2I2 539 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 KCNIP3Q9Y2W7 256 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 RBMX2Q9Y388 322 aaKnown RBP1.85□□□□□ -2.11
SRP54-204ENST00000553923 FBXO7Q9Y3I1 522 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 GMPPBQ9Y5P6 360 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 SYNJ2O15056 1496 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 GRIN2DO15399 1336 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 SH3TC1Q8TE82 1336 aa1.85□□□□□ -2.11
SRP54-204ENST00000553923 GOLGA8QA0A0J9YX86 632 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 A0A1B0GUS0 222 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 TCRBV9S1A1TA0A576 114 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 TMEM120BA0PK00 339 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 IGLON5A6NGN9 336 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 TRPC5OSA6NMA1 111 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 PDZK1P1A8MUH7 402 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 M0R3G1 203 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 GOSR2O14653 212 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 TM9SF1O15321 606 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 TNFSF12O43508 249 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 LATO43561 262 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 OR10H3O60404 316 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 ZNF254O75437 659 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 HSBP1O75506 76 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 ERLIN2O94905 339 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 CCNB2O95067 398 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 IFNW1P05000 195 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 FCGR3AP08637 254 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 KRT16P08779 473 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 UBTFL1P0CB47 393 aaPredicted RBP1.84□□□□□ -2.11
SRP54-204ENST00000553923 BCKDHAP12694 445 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 HPGDP15428 266 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 PMCHP20382 165 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 BCL3P20749 454 aa1.84□□□□□ -2.11
SRP54-204ENST00000553923 SERPINA2P20848 420 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms