RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 TUBAL3A6NHL2 446 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 LRRIQ4A6NIV6 560 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 SLC37A4O43826 429 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 NEMFO60524 1076 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 LYPLA2O95372 231 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 PSG2P11465 335 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 OAS2P29728 719 aaKnown RBP4.13□□□□□ -1.75
PCNX1-205ENST00000553508 HOXA9P31269 272 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 RPL29P47914 159 aaKnown RBP4.13□□□□□ -1.75
PCNX1-205ENST00000553508 EMDP50402 254 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 OC90Q02509 493 aaPredicted RBP4.13□□□□□ -1.75
PCNX1-205ENST00000553508 MAPK6Q16659 721 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 ZNF630Q2M218 657 aaPredicted RBP4.13□□□□□ -1.75
PCNX1-205ENST00000553508 PPM1LQ5SGD2 360 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 PAQR9Q6ZVX9 377 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 GET4Q7L5D6 327 aaPredicted RBP4.13□□□□□ -1.75
PCNX1-205ENST00000553508 ASCL5Q7RTU5 278 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 SNX32Q86XE0 403 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 BATF2Q8N1L9 274 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 ELMO2Q96JJ3 720 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 SMIM14Q96QK8 99 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 RAB34Q9BZG1 259 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 NT5C3AQ9H0P0 336 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 POLR3FQ9H1D9 316 aaPredicted RBP4.13□□□□□ -1.75
PCNX1-205ENST00000553508 OR1A1Q9P1Q5 309 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 SPRR3Q9UBC9 169 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 DNPEPQ9ULA0 475 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 ZNF490Q9ULM2 529 aaPredicted RBP4.13□□□□□ -1.75
PCNX1-205ENST00000553508 USP24Q9UPU5 2620 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 WDFY4Q6ZS81 3184 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 FAM208BQ5VWN6 2430 aa4.13□□□□□ -1.75
PCNX1-205ENST00000553508 KMT2BQ9UMN6 2715 aaPredicted RBP4.13□□□□□ -1.75
PCNX1-205ENST00000553508 MYO10Q9HD67 2058 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 CFAP54Q96N23 3096 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 ZFYVE26Q68DK2 2539 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 A0A1B0GUA9 196 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 ARHGEF35A5YM69 484 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 TMEM110-MUSTN1A8MSY1 372 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 PRRG1O14668 218 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 KERAO60938 352 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 GSTT2P0CG29 244 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 GSTT2BP0CG30 244 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 ARF4P18085 180 aaPredicted RBP4.12□□□□□ -1.75
PCNX1-205ENST00000553508 AKT2P31751 481 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 RPL4P36578 427 aaKnown RBP4.12□□□□□ -1.75
PCNX1-205ENST00000553508 NAMPTP43490 491 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 HTR4Q13639 388 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 DPYSL3Q14195 570 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 PSMD5Q16401 504 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 CCDC92Q53HC0 331 aaPredicted RBP4.12□□□□□ -1.75
PCNX1-205ENST00000553508 DCST2Q5T1A1 773 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 FAM159AQ6UWV7 190 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 WDR88Q6ZMY6 472 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 TMEM110Q86TL2 294 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 PPP1R27Q86WC6 154 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 OR2T33Q8NG76 320 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 OR52E1Q8NGJ3 308 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 OR2A12Q8NGT7 310 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 TRUB1Q8WWH5 349 aaKnown RBP4.12□□□□□ -1.75
PCNX1-205ENST00000553508 KIFAP3Q92845 792 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 IL22RA2Q969J5 263 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 ADIPOR1Q96A54 375 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 ZNF707Q96C28 371 aaPredicted RBP4.12□□□□□ -1.75
PCNX1-205ENST00000553508 CPB2Q96IY4 423 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 IFT74Q96LB3 600 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 CCDC94Q9BW85 323 aaPredicted RBP4.12□□□□□ -1.75
PCNX1-205ENST00000553508 NXF3Q9H4D5 531 aaKnown RBP4.12□□□□□ -1.75
PCNX1-205ENST00000553508 FANCFQ9NPI8 374 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 APPL1Q9UKG1 709 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 RAB23Q9ULC3 237 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 HES2Q9Y543 173 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.12□□□□□ -1.75
PCNX1-205ENST00000553508 CNOT1A5YKK6 2376 aaKnown RBP4.12□□□□□ -1.75
PCNX1-205ENST00000553508 CACNA1GO43497 2377 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 IGF2RP11717 2491 aa4.12□□□□□ -1.75
PCNX1-205ENST00000553508 MAP1BP46821 2468 aaKnown RBP4.12□□□□□ -1.75
PCNX1-205ENST00000553508 F5P12259 2224 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 PLXNA3P51805 1871 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 USP27XA6NNY8 438 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 PFKFB2O60825 505 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 ECI2O75521 394 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 B3GAT3O94766 335 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 SUPT7LO94864 414 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 SLITRK3O94933 977 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 BAG2O95816 211 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 GLRA2P23416 452 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 PRDX2P32119 198 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 ARL2P36404 184 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 STARP49675 285 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 STARD6P59095 220 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 MRPS11P82912 194 aaKnown RBP4.11□□□□□ -1.75
PCNX1-205ENST00000553508 VLDLRP98155 873 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 STAC2Q6ZMT1 411 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 TMEM26Q6ZUK4 368 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 TAF8Q7Z7C8 310 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 IFNEQ86WN2 208 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 ZBTB44Q8NCP5 570 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 FGF13Q92913 245 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 CAB39LQ9H9S4 337 aa4.11□□□□□ -1.75
PCNX1-205ENST00000553508 CD274Q9NZQ7 290 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms