RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 LINC00052Q96N35 136 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 KIR3DX1Q9H7L2 352 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 IL21RQ9HBE5 538 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 V9GY05 133 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 A0A087WV62 115 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 SNRPGP15A8MWD9 76 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 SCAMP1O15126 338 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 DNAJB6O75190 326 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 NDUFB2O95178 105 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 RAB40ALP0C0E4 278 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 GABRA3P34903 492 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 NUP62P37198 522 aaPredicted RBP16.12■□□□□ 0.17
SYNE3-202ENST00000553340 FGL2Q14314 439 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 LINC00303Q3SY05 128 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 ZNF626Q68DY1 528 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 ZCCHC12Q6PEW1 402 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 IQCF2Q8IXL9 164 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 ZNF614Q8N883 585 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 SYNPRQ8TBG9 265 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 THEM6Q8WUY1 208 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 HMGB4Q8WW32 186 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 RAB40AQ8WXH6 277 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 PTCHD1Q96NR3 888 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 ZNF426Q9BUY5 554 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 MRI1Q9BV20 369 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 MED9Q9NWA0 146 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 SLC17A4Q9Y2C5 497 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 IER3IP1Q9Y5U9 82 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 HEBP2Q9Y5Z4 205 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 SLC22A7Q9Y694 548 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 MCRIP1C9JLW8 97 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 OR2A4O95047 310 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 IL5P05113 134 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 NGFRP08138 427 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 NAGAP17050 411 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 ANXA7P20073 488 aaKnown RBP16.12■□□□□ 0.17
SYNE3-202ENST00000553340 DIO1P49895 249 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 CLDN12P56749 244 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 PPP2CBP62714 309 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 PPP2CAP67775 309 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 ALG10BQ5I7T1 473 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 TMEM81Q6P7N7 255 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 KIAA1324Q6UXG2 1013 aaKnown RBP16.12■□□□□ 0.17
SYNE3-202ENST00000553340 OR2A7Q96R45 310 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 MYADMQ96S97 322 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 C1QTNF6Q9BXI9 259 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 CFHR5Q9BXR6 569 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 EVA1AQ9H8M9 152 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 FOXJ3Q9UPW0 622 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 ZNF281Q9Y2X9 895 aa16.12■□□□□ 0.17
SYNE3-202ENST00000553340 OR6C65A6NJZ3 312 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 GALR3O60755 368 aaPredicted RBP16.11■□□□□ 0.17
SYNE3-202ENST00000553340 TSPAN9O75954 239 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 SMIM10L1P0DMW3 83 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 P2RX1P51575 399 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 OR5M10Q6IEU7 315 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 FBXO42Q6P3S6 717 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 SMIM10Q96HG1 83 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 KLHL15Q96M94 604 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 ZNF578Q96N58 590 aaPredicted RBP16.11■□□□□ 0.17
SYNE3-202ENST00000553340 AIFM2Q9BRQ8 373 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 UTP23Q9BRU9 249 aaKnown RBP16.11■□□□□ 0.17
SYNE3-202ENST00000553340 PRDM9Q9NQV7 894 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 ING1Q9UK53 422 aaPredicted RBP16.11■□□□□ 0.17
SYNE3-202ENST00000553340 COPS3Q9UNS2 423 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 PCDHGA5Q9Y5G8 931 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 MYO7AQ13402 2215 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 OR2M5A3KFT3 312 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 URADA6NGE7 173 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 ACOT7O00154 380 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 LDB3O75112 727 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 CST6Q15828 149 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 RGS7BPQ6MZT1 257 aaPredicted RBP16.11■□□□□ 0.17
SYNE3-202ENST00000553340 PWWP2BQ6NUJ5 590 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 FAAP20Q6NZ36 180 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 C15orf40Q8WUR7 153 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 HSPA12BQ96MM6 686 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 TRIM2Q9C040 744 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 C2orf42Q9NWW7 574 aa16.11■□□□□ 0.17
SYNE3-202ENST00000553340 THAP10Q9P2Z0 257 aaPredicted RBP16.11■□□□□ 0.17
SYNE3-202ENST00000553340 SELENOFO60613 162 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 NDUFB6O95139 128 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 ZNF10P21506 573 aaPredicted RBP16.1■□□□□ 0.17
SYNE3-202ENST00000553340 DCTDP32321 178 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 SGCGQ13326 291 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 BTN1A1Q13410 526 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 EXOSC7Q15024 291 aaKnown RBP16.1■□□□□ 0.17
SYNE3-202ENST00000553340 TUSC1Q2TAM9 212 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 FAM122CQ6P4D5 195 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 HAVCR1Q96D42 359 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 SCN2AQ99250 2005 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 POLE3Q9NRF9 147 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 TMEM74BQ9NUR3 256 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 OR5V1Q9UGF6 321 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 SERGEFQ9UGK8 458 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.1■□□□□ 0.17
SYNE3-202ENST00000553340 P2RX6O15547 441 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 CALCBP10092 127 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 NAT1P18440 290 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 MECP2P51608 486 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms