RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 OR52I1Q8NGK6 324 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 MITD1Q8WV92 249 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 C8orf44Q96CB5 159 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 ELOVL4Q9GZR5 314 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 IL22Q9GZX6 179 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 ZNF696Q9H7X3 374 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 LYRM4Q9HD34 91 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 SPRR3Q9UBC9 169 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 CTSZQ9UBR2 303 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 MUTYHQ9UIF7 546 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 PLLPQ9Y342 182 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 CNTNAP2Q9UHC6 1331 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 TUBAL3A6NHL2 446 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 LRRIQ3A6PVS8 624 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-208ENST00000553278 GABRR3A8MPY1 467 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 FAM220BPB1ANY3 271 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 SOCS3O14543 225 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 CABYRO75952 493 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 ERLIN2O94905 339 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 ANXA5P08758 320 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 UBTFL1P0CB47 393 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-208ENST00000553278 MYL2P10916 166 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 U2AF2P26368 475 aaKnown RBP eCLIP4.61□□□□□ -1.67
SCFD1-208ENST00000553278 PTGDSP41222 190 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 YAP1P46937 504 aaKnown RBP4.61□□□□□ -1.67
SCFD1-208ENST00000553278 PLK1P53350 603 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 MRPS22P82650 360 aaKnown RBP4.61□□□□□ -1.67
SCFD1-208ENST00000553278 FCHO2Q0JRZ9 810 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 CYLC2Q14093 348 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-208ENST00000553278 SAMD4BQ5PRF9 694 aaKnown RBP4.61□□□□□ -1.67
SCFD1-208ENST00000553278 REG3GQ6UW15 175 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 SLC25A48Q6ZT89 311 aaKnown RBP4.61□□□□□ -1.67
SCFD1-208ENST00000553278 NR2C2APQ86WQ0 139 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 NRMQ8IXM6 262 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 OR4Q3Q8NH05 313 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 OR56B4Q8NH76 319 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 RHEBL1Q8TAI7 183 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 PAQR8Q8TEZ7 354 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 ZNF707Q96C28 371 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-208ENST00000553278 CCDC126Q96EE4 140 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 TBX15Q96SF7 602 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 CHIAQ9BZP6 476 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 MFFQ9GZY8 342 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 RACGAP1Q9H0H5 632 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 ZBP1Q9H171 429 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 PXMP2Q9NR77 195 aa4.61□□□□□ -1.67
SCFD1-208ENST00000553278 NAP1L2Q9ULW6 460 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-208ENST00000553278 A0A0J9YYE9 177 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 GFYI3L273 518 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 DYNC1I1O14576 645 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 RAB29O14966 203 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 SOX15O60248 233 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 HUS1O60921 280 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 GJB5O95377 273 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 C1orf105O95561 183 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 TRBC1P01850 177 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 TUBG1P23258 451 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 HTR1FP30939 366 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 NAA10P41227 235 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-208ENST00000553278 CD151P48509 253 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 PRELPP51888 382 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 HADHBP55084 474 aaKnown RBP4.6□□□□□ -1.67
SCFD1-208ENST00000553278 ERVK11-1P61568 191 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 RPL32P62910 135 aaKnown RBP4.6□□□□□ -1.67
SCFD1-208ENST00000553278 MECOMQ03112 1051 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 ITIH4Q14624 930 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 ARL6IP1Q15041 203 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 C2CD6Q53TS8 623 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 HSP90AA4PQ58FG1 418 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 BEX5Q5H9J7 111 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 SLC22A10Q63ZE4 541 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 UFSP1Q6NVU6 142 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 GDPD3Q7L5L3 318 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 DTX3LQ8TDB6 740 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 PYROXD1Q8WU10 500 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 OXGR1Q96P68 337 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 RBM4BQ9BQ04 359 aaKnown RBP4.6□□□□□ -1.67
SCFD1-208ENST00000553278 BARHL1Q9BZE3 327 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 NMUR2Q9GZQ4 415 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 C8orf33Q9H7E9 229 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-208ENST00000553278 TUBG2Q9NRH3 451 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 GPATCH2LQ9NWQ4 482 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 MTCH1Q9NZJ7 389 aa4.6□□□□□ -1.67
SCFD1-208ENST00000553278 SMIM28A0A1B0GU29 152 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 CCT8L1PA6NM43 557 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 ZNF705EA8MWA4 302 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-208ENST00000553278 E9PAM4 449 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 K7ENP7 123 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 SIRPB1O00241 398 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 GOSR2O14653 212 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 NVLO15381 856 aaKnown RBP4.59□□□□□ -1.67
SCFD1-208ENST00000553278 FGFR1OPO95684 399 aaKnown RBP4.59□□□□□ -1.67
SCFD1-208ENST00000553278 MBP02144 154 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 MELTFP08582 738 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 STAG3L2P0CL84 134 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 LAMP1P11279 417 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 IGHV1-2P23083 117 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 GCKP35557 465 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 MRPL19P49406 292 aaKnown RBP4.59□□□□□ -1.67
SCFD1-208ENST00000553278 HMGCS2P54868 508 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms