RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 EIF3MQ7L2H7 374 aaKnown RBP10.44□□□□□ -0.74
CKAP4-202ENST00000552828 GALNT5Q7Z7M9 940 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 MTDHQ86UE4 582 aaKnown RBP10.44□□□□□ -0.74
CKAP4-202ENST00000552828 SNX32Q86XE0 403 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 ZNF433Q8N7K0 673 aaPredicted RBP10.44□□□□□ -0.74
CKAP4-202ENST00000552828 PCYOX1LQ8NBM8 494 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 ATP6V1C2Q8NEY4 427 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 ELOA3Q8NG57 546 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 ST8SIA1Q92185 356 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 ZG16BQ96DA0 208 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 ADAD1Q96M93 576 aaKnown RBP10.44□□□□□ -0.74
CKAP4-202ENST00000552828 ANKRD27Q96NW4 1050 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 ZNF300Q96RE9 604 aaPredicted RBP10.44□□□□□ -0.74
CKAP4-202ENST00000552828 CGREF1Q99674 301 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 THUMPD3Q9BV44 507 aaKnown RBP10.44□□□□□ -0.74
CKAP4-202ENST00000552828 SLC38A1Q9H2H9 487 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 A4GALTQ9NPC4 353 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.44□□□□□ -0.74
CKAP4-202ENST00000552828 TMEM160Q9NX00 188 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 MGAT4BQ9UQ53 548 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 CR1P17927 2039 aa10.44□□□□□ -0.74
CKAP4-202ENST00000552828 FREM1Q5H8C1 2179 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 A0A0G2JPF8 293 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 AGAP5A6NIR3 686 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 HNRNPCL2B2RXH8 293 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 HNRNPCL3B7ZW38 293 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 C5orf58C9J3I9 102 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 E7EQL1 145 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 NDUFAB1O14561 156 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 HNRNPCL1O60812 293 aaKnown RBP10.43□□□□□ -0.74
CKAP4-202ENST00000552828 FAM107AO95990 144 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 CSTAP01040 98 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 NPPAP01160 153 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 BCHEP06276 602 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 DBIP07108 87 aaKnown RBP10.43□□□□□ -0.74
CKAP4-202ENST00000552828 NUDT7P0C024 238 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 FAM157CP0CG43 387 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 HNRNPCL4P0DMR1 293 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 UBL4AP11441 157 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 IL7RP16871 459 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 PTAFRP25105 342 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 DIO1P49895 249 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 KCNJ10P78508 379 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 VLDLRP98155 873 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 SKP2Q13309 424 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 MAPK11Q15759 364 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 MAPK14Q16539 360 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 TMEM249Q2WGJ8 235 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 TRMT5Q32P41 509 aaKnown RBP10.43□□□□□ -0.74
CKAP4-202ENST00000552828 C6orf52Q5T4I8 152 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 GCNT6Q5T4J0 391 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 PRAMEF8Q5VWM4 474 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 PRAMEF7Q5VXH5 474 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 FBXW9Q5XUX1 488 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 ABLIM2Q6H8Q1 611 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 TMPPEQ6ZT21 453 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 PIGWQ7Z7B1 504 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 PEX5LQ8IYB4 626 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 RP9Q8TA86 221 aaKnown RBP10.43□□□□□ -0.74
CKAP4-202ENST00000552828 MAL2Q969L2 176 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 ZNF775Q96BV0 537 aaPredicted RBP10.43□□□□□ -0.74
CKAP4-202ENST00000552828 TMEM19Q96HH6 336 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 TNFRSF13CQ96RJ3 184 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 SH3GL1Q99961 368 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 DHRS9Q9BPW9 319 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 CPPED1Q9BRF8 314 aaPredicted RBP10.43□□□□□ -0.74
CKAP4-202ENST00000552828 LAT2Q9GZY6 243 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 QRSL1Q9H0R6 528 aaKnown RBP10.43□□□□□ -0.74
CKAP4-202ENST00000552828 IKZF5Q9H5V7 419 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 CACYBPQ9HB71 228 aaKnown RBP10.43□□□□□ -0.74
CKAP4-202ENST00000552828 CBLN4Q9NTU7 201 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 CDC42EP3Q9UKI2 254 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 SLC35A3Q9Y2D2 325 aa10.43□□□□□ -0.74
CKAP4-202ENST00000552828 CENPVL1A0A0U1RR11 272 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 MRASO14807 208 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 CYP7B1O75881 506 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 F12P00748 615 aaPredicted RBP10.42□□□□□ -0.74
CKAP4-202ENST00000552828 UBTFL6P0CB48 400 aaPredicted RBP10.42□□□□□ -0.74
CKAP4-202ENST00000552828 THBS2P35442 1172 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 CCR4P51679 360 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 SESN3P58005 492 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 CSNK2A1P68400 391 aaPredicted RBP10.42□□□□□ -0.74
CKAP4-202ENST00000552828 REP15Q6BDI9 236 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 TMEM108Q6UXF1 575 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 HMGN2P46Q86SG4 172 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 CMIPQ8IY22 773 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 ZNF100Q8IYN0 542 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 TMCO5AQ8N6Q1 288 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 SLC25A43Q8WUT9 341 aaPredicted RBP10.42□□□□□ -0.74
CKAP4-202ENST00000552828 WDR60Q8WVS4 1066 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 LRRC58Q96CX6 371 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 MUS81Q96NY9 551 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 OR5B2Q96R09 309 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 CCT8L2Q96SF2 557 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 CCDC106Q9BWC9 280 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 CACNG6Q9BXT2 260 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 TMEM38AQ9H6F2 299 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 BCL2L10Q9HD36 194 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 SERINC1Q9NRX5 453 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 ACER3Q9NUN7 267 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms