RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 TRIM64A6NGJ6 449 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 TRIM64BA6NI03 449 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 ERI2A8K979 691 aaKnown RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 E9PI62 339 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 GOLGA8NF8WBI6 632 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 H0YAE9 185 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 GOLGA8RI6L899 631 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 TAPBPO15533 448 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 TTI1O43156 1089 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 KIF5CO60282 957 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 OR10H2O60403 315 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 HCN1O60741 890 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 RDH16O75452 317 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 ACSL3O95573 720 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 AIFM1O95831 613 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 CD8AP01732 235 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 FTH1P02794 183 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 STATHP02808 62 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 FHP07954 510 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 INHBAP08476 426 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 MPC1LP0DKB6 136 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 SMIM18P0DKX4 95 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 CCL3P10147 92 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 ACP2P11117 423 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF24P17028 368 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 CNR1P21554 472 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 AZGP1P25311 298 aaKnown RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 STIP1P31948 543 aaKnown RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 SOAT1P35610 550 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 HSD17B3P37058 310 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 MAGEA5P43359 124 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 HOXA1P49639 335 aaPredicted RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 PDLIM4P50479 330 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 FUT6P51993 359 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 DVL1P1P54792 670 aaPredicted RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 GAS1P54826 345 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 CDKN2DP55273 166 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 UBASH3AP57075 661 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 B3GALT5-AS1P59052 145 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 EIF3EP60228 445 aaKnown RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 CX3CL1P78423 397 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 REEP5Q00765 189 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF33BQ06732 778 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 FUT7Q11130 342 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 PNRC1Q12796 327 aaPredicted RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 KIF5AQ12840 1032 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 CDH17Q12864 832 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 GAGE5Q13069 117 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 GAGE6Q13070 117 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 CUL3Q13618 768 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 ABRAXAS2Q15018 415 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 NSDHLQ15738 373 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 CEBPEQ15744 281 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 TPD52L1Q16890 204 aaPredicted RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 IZUMO4Q1ZYL8 232 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 TMEM44Q2T9K0 475 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 SLC25A35Q3KQZ1 300 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 ACSF3Q4G176 576 aaPredicted RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 SYT14P1Q58G82 188 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 ELFN2Q5R3F8 820 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 FAM91A1Q658Y4 838 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 TTC27Q6P3X3 843 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 CNSTQ6PJW8 725 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 CES3Q6UWW8 571 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 KCTD8Q6ZWB6 473 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 BZW1Q7L1Q6 419 aaKnown RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 PIWIL4Q7Z3Z4 852 aaKnown RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 TMPRSS11BQ86T26 416 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 LRRC6Q86X45 466 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 NUDT13Q86X67 352 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 C9orf40Q8IXQ3 194 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 ARHGAP24Q8N264 748 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 PRELID2Q8N945 189 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 WDSUB1Q8N9V3 476 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 C9orf106Q8NAJ2 232 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 NEIL3Q8TAT5 605 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 CA5BP1Q8WTZ4 195 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 NUDCD2Q8WVJ2 157 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 SECTM1Q8WVN6 248 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 NSMAFQ92636 917 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 NEIL2Q969S2 332 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 ADIPOR1Q96A54 375 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 ZBTB9Q96C00 473 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 MS4A6EQ96DS6 147 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 C11orf24Q96F05 449 aaPredicted RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 PDLIM5Q96HC4 596 aaKnown RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 MUS81Q96NY9 551 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 HBEGFQ99075 208 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 NDNQ99608 321 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 KLHDC3Q9BQ90 382 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 UTP23Q9BRU9 249 aaKnown RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 INPP5KQ9BT40 448 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 LRRC1Q9BTT6 524 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 TRAF4Q9BUZ4 470 aaPredicted RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 ACAT2Q9BWD1 397 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 C1QTNF4Q9BXJ3 329 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 PRRG4Q9BZD6 226 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 HIPK2Q9H2X6 1198 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 LRRC40Q9H9A6 602 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 IL1RL2Q9HB29 575 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms