RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 GABRPO00591 440 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 CTDSP2O14595 271 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 IDH3BO43837 385 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 TXNDC12O95881 172 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 CD14P08571 375 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 GAAP10253 952 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 APEHP13798 732 aaKnown RBP10.46□□□□□ -0.73
RAB5C-208ENST00000551338 CELP19835 753 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 ITPKBP27987 946 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 S100A5P33763 92 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 NRG3P56975 720 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 CTXN1P60606 82 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 ACTC1P68032 377 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 ACTA1P68133 377 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 RPL18Q07020 188 aaKnown RBP10.46□□□□□ -0.73
RAB5C-208ENST00000551338 ATP1A4Q13733 1029 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 CBFBQ13951 182 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 LYPD8Q6UX82 237 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 TMPRSS11AQ6ZMR5 421 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 SSX6Q7RTT6 188 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 NANOGNBQ7Z5D8 188 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 CCDC190Q86UF4 302 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 MARCH9Q86YJ5 346 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 RFLNBQ8N5W9 214 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 C10orf53Q8N6V4 93 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 EXD3Q8N9H8 876 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 ZBTB44Q8NCP5 570 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 OR8K3Q8NH51 312 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 B4GALNT2Q8NHY0 566 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 GPR119Q8TDV5 335 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 SMAP2Q8WU79 429 aaPredicted RBP10.46□□□□□ -0.73
RAB5C-208ENST00000551338 TAAR8Q969N4 342 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 PMEPA1Q969W9 287 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 C8orf44Q96CB5 159 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 C1GALT1C1Q96EU7 318 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 Q96M85 177 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 NMNAT3Q96T66 252 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 LPAR4Q99677 370 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 MED18Q9BUE0 208 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 PTDSS2Q9BVG9 487 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 FKRPQ9H9S5 495 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 NANSQ9NR45 359 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 RXFP3Q9NSD7 469 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 ZNF229Q9UJW7 825 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 HRH3Q9Y5N1 445 aa10.46□□□□□ -0.73
RAB5C-208ENST00000551338 KIAA1549Q9HCM3 1950 aa10.46□□□□□ -0.74
RAB5C-208ENST00000551338 IQCMA0A1B0GVH7 501 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 SHISA3A0PJX4 238 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 B4DXG7 233 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 E9PI62 339 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 RNF13O43567 381 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 NPIPB7O75200 414 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 SP9P0CG40 484 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 CCL4P13236 92 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 SPI1P17947 270 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 CXCR1P25024 350 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 MPLP40238 635 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 RPS5P46782 204 aaKnown RBP10.45□□□□□ -0.74
RAB5C-208ENST00000551338 TGM4P49221 684 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 DIO1P49895 249 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 RORCP51449 518 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 POLR2HP52434 150 aaKnown RBP10.45□□□□□ -0.74
RAB5C-208ENST00000551338 FBXW4P57775 412 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 MC2RQ01718 297 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 LGALS3BPQ08380 585 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 HNRNPA0Q13151 305 aaKnown RBP10.45□□□□□ -0.74
RAB5C-208ENST00000551338 GPR50Q13585 617 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 IL10RAQ13651 578 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 IL11RAQ14626 422 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 PCOLCEQ15113 449 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 RGS21Q2M5E4 152 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.45□□□□□ -0.74
RAB5C-208ENST00000551338 COL28A1Q2UY09 1125 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 ALG10Q5BKT4 473 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 SLC35D3Q5M8T2 416 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 LINC01590Q5TEZ4 76 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 C1QL3Q5VWW1 255 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 TCEAL6Q6IPX3 200 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 LEG1Q6P5S2 330 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 TMEM91Q6ZNR0 172 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 SLC35F2Q8IXU6 374 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 GHDCQ8N2G8 530 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 POMGNT2Q8NAT1 580 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 AGBL5Q8NDL9 886 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 THAP3Q8WTV1 239 aaPredicted RBP10.45□□□□□ -0.74
RAB5C-208ENST00000551338 TCEAL3Q969E4 200 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 SLC25A46Q96AG3 418 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 C4orf36Q96KX1 117 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 KCTD7Q96MP8 289 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 CNN2Q99439 309 aaKnown RBP10.45□□□□□ -0.74
RAB5C-208ENST00000551338 COQ7Q99807 217 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 TMED9Q9BVK6 235 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 MROQ9BYG7 248 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 BABAM2Q9NXR7 383 aa10.45□□□□□ -0.74
RAB5C-208ENST00000551338 CRNNQ9UBG3 495 aaPredicted RBP10.45□□□□□ -0.74
RAB5C-208ENST00000551338 C19orf25Q9UFG5 118 aaPredicted RBP10.45□□□□□ -0.74
RAB5C-208ENST00000551338 TRAV36DV7A0A075B6V5 113 aa10.44□□□□□ -0.74
RAB5C-208ENST00000551338 TMED7-TICAM2A0A0A6YYA0 188 aa10.44□□□□□ -0.74
RAB5C-208ENST00000551338 A0A1W2PQL4 384 aaPredicted RBP10.44□□□□□ -0.74
RAB5C-208ENST00000551338 ANKUB1A6NFN9 424 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms