RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 ST3GAL3Q11203 375 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 FAM69AQ5T7M9 428 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 TTC33Q6PID6 262 aaPredicted RBP14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 WDR88Q6ZMY6 472 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 CCDC121Q6ZUS5 278 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 FAM214BQ7L5A3 538 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 CYP4Z1Q86W10 505 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 RELL2Q8NC24 303 aaPredicted RBP14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 MFSD8Q8NHS3 518 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 TAAR8Q969N4 342 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 MCUR1Q96AQ8 359 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 ASB9Q96DX5 294 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 TMEM43Q9BTV4 400 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 FNDC11Q9BVV2 318 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 CADM1Q9BY67 442 aaKnown RBP14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 KLHL9Q9P2J3 617 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 A4GNTQ9UNA3 340 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 EMC9Q9Y3B6 208 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 FAM32AQ9Y421 112 aaKnown RBP14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 ENPP4Q9Y6X5 453 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 EEF1E1-BLOC1S5C9J1V9 151 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 J3KTA2 159 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 EBAG9O00559 213 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 EEF1E1O43324 174 aaKnown RBP14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 SS18L1O75177 396 aaPredicted RBP14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 AKR7A3O95154 331 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 CLDN1O95832 211 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 THRBP10828 461 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 GTF2E2P29084 291 aaKnown RBP14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 TRAP1Q12931 704 aaKnown RBP14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 MTX3Q5HYI7 312 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 TMEM201Q5SNT2 666 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 OTUD3Q5T2D3 398 aaPredicted RBP14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 LCN8Q6JVE9 175 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 VWA1Q6PCB0 445 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 PGM2L1Q6PCE3 622 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 PAQR6Q6TCH4 344 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 MAMDC2Q7Z304 686 aaPredicted RBP14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 BTLAQ7Z6A9 289 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 NKAIN4Q8IVV8 208 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 CCDC103Q8IW40 242 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 TUSC5Q8IXB3 177 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 C10orf53Q8N6V4 93 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 TMEM99Q8N816 258 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 PIGXQ8TBF5 258 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 STARD4Q96DR4 205 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 LRGUKQ96M69 825 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 PRSS27Q9BQR3 290 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 PTDSS2Q9BVG9 487 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 PIGMQ9H3S5 423 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 KLHL13Q9P2N7 655 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 RHCGQ9UBD6 479 aa14.47□□□□□ -0.09
CHMP1A-209ENST00000550872 ZNF814B7Z6K7 855 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 FTCDNL1E5RQL4 147 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 PRSS44E7EML9 344 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 hCG_2039718K7EN88 272 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 RAMP1O60894 148 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 SMNDC1O75940 238 aaKnown RBP eCLIP14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 YES1P07947 543 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 CBLP22681 906 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 H3F3AP84243 136 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 GUSBP1Q15486 140 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 ABLIM2Q6H8Q1 611 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 TSEN54Q7Z6J9 526 aaKnown RBP14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 ZNF775Q96BV0 537 aaPredicted RBP14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 C7orf34Q96L11 122 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 HS6ST2Q96MM7 605 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 PSD2Q9BQI7 771 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 TRIM15Q9C019 465 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 GP6Q9HCN6 339 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 C6orf203Q9P0P8 240 aaPredicted RBP14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 PROCRQ9UNN8 238 aa14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 KLF2Q9Y5W3 355 aaPredicted RBP14.46□□□□□ -0.09
CHMP1A-209ENST00000550872 KPNA4O00629 521 aaPredicted RBP14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 ACOT8O14734 319 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 FFAR1O14842 300 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 ITGA2P17301 1181 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 RHCEP18577 417 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 GRPRP30550 384 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 AGTR1P30556 359 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 RBM34P42696 430 aaKnown RBP14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 ASCL1P50553 236 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 VLDLRP98155 873 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 MFSD13AQ14CX5 517 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 TRAM2Q15035 370 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 PDK3Q15120 406 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 TMEM225Q6GV28 225 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 LUZP2Q86TE4 346 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 OFCC1Q8IZS5 231 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 OR6K3Q8NGY3 331 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 OR6S1Q8NH40 331 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 TMEM255BQ8WV15 326 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 ZNF300Q96RE9 604 aaPredicted RBP14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 SEPHS2Q99611 448 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 TACO1Q9BSH4 297 aaKnown RBP14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 ZNF426Q9BUY5 554 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 SLC19A3Q9BZV2 496 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 BCO1Q9HAY6 547 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 NDUFAF4Q9P032 175 aa14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms