RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 KLHL4Q9C0H6 718 aa12.22□□□□□ -0.45
TROAP-213ENST00000550709 C12orf10Q9HB07 376 aa12.22□□□□□ -0.45
TROAP-213ENST00000550709 PLSCR4Q9NRQ2 329 aa12.22□□□□□ -0.45
TROAP-213ENST00000550709 NDE1Q9NXR1 346 aa12.22□□□□□ -0.45
TROAP-213ENST00000550709 EMC3Q9P0I2 261 aa12.22□□□□□ -0.45
TROAP-213ENST00000550709 C6orf203Q9P0P8 240 aaPredicted RBP12.22□□□□□ -0.45
TROAP-213ENST00000550709 FOXD3Q9UJU5 478 aaPredicted RBP12.22□□□□□ -0.45
TROAP-213ENST00000550709 SLC7A7Q9UM01 511 aa12.22□□□□□ -0.45
TROAP-213ENST00000550709 PKDREJQ9NTG1 2253 aa12.22□□□□□ -0.45
TROAP-213ENST00000550709 INTS1Q8N201 2190 aaKnown RBP12.21□□□□□ -0.45
TROAP-213ENST00000550709 TRAV36DV7A0A075B6V5 113 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 TUBAL3A6NHL2 446 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 ZNF716A6NP11 495 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 ZNF724A8MTY0 619 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 LYPD3O95274 346 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 T-ENOLP0DO92 83 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 POU2F1P14859 743 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 CALB2P22676 271 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 EDNRAP25101 427 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 GTF2E2P29084 291 aaKnown RBP12.21□□□□□ -0.45
TROAP-213ENST00000550709 CD79BP40259 229 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 YAP1P46937 504 aaKnown RBP12.21□□□□□ -0.45
TROAP-213ENST00000550709 H3F3AP84243 136 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 PIN1Q13526 163 aaPredicted RBP12.21□□□□□ -0.45
TROAP-213ENST00000550709 ANKRD34AQ69YU3 496 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 TMEM225Q6GV28 225 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 PAQR6Q6TCH4 344 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 WDR88Q6ZMY6 472 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 CBLL1Q75N03 491 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 TRPM8Q7Z2W7 1104 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 GALNT5Q7Z7M9 940 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 GPAT4Q86UL3 456 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 ZNF100Q8IYN0 542 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 ACBD4Q8NC06 268 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 MFSD8Q8NHS3 518 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 SLC41A3Q96GZ6 507 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 HSH2DQ96JZ2 352 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 DOCK7Q96N67 2140 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 TACO1Q9BSH4 297 aaKnown RBP12.21□□□□□ -0.45
TROAP-213ENST00000550709 BCO1Q9HAY6 547 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 GP6Q9HCN6 339 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 CRIM1Q9NZV1 1036 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 NOSIPQ9Y314 301 aaKnown RBP12.21□□□□□ -0.45
TROAP-213ENST00000550709 NOTCH2Q04721 2471 aa12.21□□□□□ -0.45
TROAP-213ENST00000550709 IGKV3D-15A0A087WSY6 115 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 AQP7P3A6NL99 342 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 FTCDNL1E5RQL4 147 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 KPNA4O00629 521 aaPredicted RBP12.2□□□□□ -0.46
TROAP-213ENST00000550709 CHP2O43745 196 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 IGHV3-9P01782 118 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 HSD17B1P14061 328 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 GRPRP30550 384 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 IL1RL1Q01638 556 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 PDK3Q15120 406 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 IFI44LQ53G44 452 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 SWT1Q5T5J6 900 aaKnown RBP12.2□□□□□ -0.46
TROAP-213ENST00000550709 TFAP2EQ6VUC0 442 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 GDF7Q7Z4P5 450 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 ZNF295-AS1Q8N0V1 137 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 KDM8Q8N371 416 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 EPYCQ99645 322 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 PCDHAC1Q9H158 963 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 SEC14L4Q9UDX3 406 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 CD300AQ9UGN4 299 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 RIMS3Q9UJD0 308 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 SNX13Q9Y5W8 968 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 V9GYQ6 96 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 MED12LQ86YW9 2145 aa12.2□□□□□ -0.46
TROAP-213ENST00000550709 LRRN3E7EW58 273 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 C16orf97H3BN30 126 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 M0R082 166 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 GPR171O14626 319 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 OR2T1O43869 369 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 UBOX5O94941 541 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 OR5F1O95221 314 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 IFNW1P05000 195 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 NTF4P34130 210 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 UGT2B10P36537 528 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 SLC17A1Q14916 467 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 FAM69AQ5T7M9 428 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 TTC33Q6PID6 262 aaPredicted RBP12.19□□□□□ -0.46
TROAP-213ENST00000550709 C5orf46Q6UWT4 87 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 CASP12Q6UXS9 341 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 BEND4Q6ZU67 534 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 NKAIN4Q8IVV8 208 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 UBE2J2Q8N2K1 259 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 OR9K2Q8NGE7 335 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 ZNF417Q8TAU3 575 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 GEMIN6Q8WXD5 167 aaKnown RBP12.19□□□□□ -0.46
TROAP-213ENST00000550709 MOGAT1Q96PD6 335 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 ZNF587Q96SQ5 575 aaPredicted RBP12.19□□□□□ -0.46
TROAP-213ENST00000550709 TMEM43Q9BTV4 400 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 AMBRA1Q9C0C7 1298 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 ELOVL5Q9NYP7 299 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 RHCGQ9UBD6 479 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 PRSS50Q9UI38 385 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 RPS6KA6Q9UK32 745 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 CRYBG3Q68DQ2 2970 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 UNC79Q9P2D8 2635 aa12.19□□□□□ -0.46
TROAP-213ENST00000550709 CENPEQ02224 2701 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms