RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 G6PC2Q9NQR9 355 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 SMYD2Q9NRG4 433 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ASIC5Q9NY37 505 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 MAT2BQ9NZL9 334 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ASIC3Q9UHC3 531 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 GUCA1BQ9UMX6 200 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 CFL2Q9Y281 166 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 B3GALT5Q9Y2C3 310 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 TEX264Q9Y6I9 313 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 NCKAP5O14513 1909 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 EML6Q6ZMW3 1958 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 DOCK7Q96N67 2140 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 TENM3Q9P273 2699 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 IGLV3-32A0A0A0MS00 114 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 GXYLT2A0PJZ3 443 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 A6NLC8 198 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 SHISA9B4DS77 424 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 K7EPI3 171 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 ADAMDEC1O15204 470 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 SSX4O60224 188 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 LMX1BO60663 402 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 UGDHO60701 494 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 REM1O75628 298 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 SEMA3DO95025 777 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 VENTXO95231 258 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 GBAP04062 536 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 ALDOAP04075 364 aaKnown RBP3.11□□□□□ -1.91
LIMA1-206ENST00000550611 NGFRP08138 427 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 CSF1P09603 554 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 CCDC166P0CW27 439 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 PCNAP12004 261 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 SRD5A1P18405 259 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 NT5EP21589 574 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 IGFBP5P24593 272 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 PIK3R1P27986 724 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 ELK3P41970 407 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 FNTAP49354 379 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 RAP1GDS1P52306 607 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 PNLIPRP2P54317 469 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 CASP9P55211 416 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 DSCR9P59020 149 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 GPX6P59796 221 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 IRX1P78414 480 aaPredicted RBP3.11□□□□□ -1.91
LIMA1-206ENST00000550611 PLCXD2Q0VAA5 305 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 ILF2Q12905 390 aaKnown RBP3.11□□□□□ -1.91
LIMA1-206ENST00000550611 DLG1Q12959 904 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 EFR3AQ14156 821 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 EXOSC7Q15024 291 aaKnown RBP3.11□□□□□ -1.91
LIMA1-206ENST00000550611 TAB1Q15750 504 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 NNATQ16517 81 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 EXOC3L2Q2M3D2 409 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 LIPNQ5VXI9 398 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 CYB5R2Q6BCY4 276 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 MFSD12Q6NUT3 480 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 SLC48A1Q6P1K1 146 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 TMEM65Q6PI78 240 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 CCDC137Q6PK04 289 aaKnown RBP3.11□□□□□ -1.91
LIMA1-206ENST00000550611 CYP20A1Q6UW02 462 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 NPSR1Q6W5P4 371 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 CYS1Q717R9 158 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 CHMP1BQ7LBR1 199 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.11□□□□□ -1.91
LIMA1-206ENST00000550611 TBC1D1Q86TI0 1168 aaPredicted RBP3.11□□□□□ -1.91
LIMA1-206ENST00000550611 UBQLNLQ8IYU4 475 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 GABRG1Q8N1C3 465 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 L3MBTL4Q8NA19 623 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 STEAP2Q8NFT2 490 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 OR52R1Q8NGF1 315 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 ZNF675Q8TD23 568 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 TRPC4APQ8TEL6 797 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 HSD17B8Q92506 261 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 HTRA1Q92743 480 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 PROX1Q92786 737 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 TMBIM1Q969X1 311 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 S100PBPQ96BU1 408 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 TM4SF18Q96CE8 201 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 DTNBP1Q96EV8 351 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 CNRIP1Q96F85 164 aaPredicted RBP3.11□□□□□ -1.91
LIMA1-206ENST00000550611 GMPPAQ96IJ6 420 aaPredicted RBP3.11□□□□□ -1.91
LIMA1-206ENST00000550611 MS4A14Q96JA4 679 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 VSTM2LQ96N03 204 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 ATOH8Q96SQ7 321 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 MYCBPQ99417 103 aaPredicted RBP3.11□□□□□ -1.91
LIMA1-206ENST00000550611 MTERF1Q99551 399 aaKnown RBP3.11□□□□□ -1.91
LIMA1-206ENST00000550611 SHARPINQ9H0F6 387 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 DDX47Q9H0S4 455 aaKnown RBP3.11□□□□□ -1.91
LIMA1-206ENST00000550611 DSN1Q9H410 356 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 RHOJQ9H4E5 214 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 CAB39LQ9H9S4 337 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 WDR41Q9HAD4 459 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 PPANQ9NQ55 473 aaKnown RBP3.11□□□□□ -1.91
LIMA1-206ENST00000550611 GLRX2Q9NS18 164 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 CD274Q9NZQ7 290 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 KLRF1Q9NZS2 232 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 PRODH2Q9UF12 536 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 CLEC4AQ9UMR7 237 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 RCE1Q9Y256 329 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 ACOT9Q9Y305 439 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 PLLPQ9Y342 182 aa3.11□□□□□ -1.91
LIMA1-206ENST00000550611 RNF115Q9Y4L5 304 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms