RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 CASP6P55212 293 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 CSNK2A1P68400 391 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-206ENST00000550406 SLC35A1P78382 337 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 SPIBQ01892 262 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 PPP1R8Q12972 351 aaKnown RBP11.65□□□□□ -0.54
RAB5C-206ENST00000550406 SF3B4Q15427 424 aaKnown RBP eCLIP11.65□□□□□ -0.54
RAB5C-206ENST00000550406 C5orf46Q6UWT4 87 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 CHMP1BQ7LBR1 199 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 SLC46A3Q7Z3Q1 461 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 MEX3DQ86XN8 651 aaKnown RBP11.65□□□□□ -0.54
RAB5C-206ENST00000550406 CCDC103Q8IW40 242 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 LRRC17Q8N6Y2 441 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 TMEM99Q8N816 258 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 OR4C15Q8NGM1 316 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 OR6S1Q8NH40 331 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 OR52J3Q8NH60 311 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 CPNE4Q96A23 557 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-206ENST00000550406 SLC25A36Q96CQ1 311 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 CCDC120Q96HB5 630 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 RAB3IPQ96QF0 476 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-206ENST00000550406 ZNF347Q96SE7 839 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 SLC19A3Q9BZV2 496 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 ANKRD19PQ9H560 264 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 PAQR5Q9NXK6 330 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-206ENST00000550406 RP1L1Q8IWN7 2480 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-206ENST00000550406 DIDO1Q9BTC0 2240 aaKnown RBP11.64□□□□□ -0.55
RAB5C-206ENST00000550406 FREM1Q5H8C1 2179 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 A0A0G2JNJ9 132 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 SH3PXD2BA1X283 911 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 CLEC18AA5D8T8 446 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 MS4A18H0YCH9 400 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 CYTIPO60759 359 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 RCBTB2O95199 551 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 GADD45GO95257 159 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 SYNGR4O95473 234 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 CH25HO95992 272 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 MAKP20794 623 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 GRPRP30550 384 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 PRKCDQ05655 676 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 FOXF2Q12947 444 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 GUSBP1Q15486 140 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 ZNF74Q16587 644 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 MS4A18Q3C1V0 323 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 FAM69AQ5T7M9 428 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 RIPPLY2Q5TAB7 128 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 TMEM211Q6ICI0 200 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 OR2T5Q6IEZ7 315 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 CLEC18BQ6UXF7 455 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 MBOAT2Q6ZWT7 520 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 FCRLAQ7L513 359 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 TMEM179BQ7Z7N9 219 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 CLEC18CQ8NCF0 446 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 OR2T29Q8NH02 315 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 RNF128Q8TEB7 428 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 ACOT11Q8WXI4 607 aaPredicted RBP11.64□□□□□ -0.55
RAB5C-206ENST00000550406 RSRC1Q96IZ7 334 aaKnown RBP11.64□□□□□ -0.55
RAB5C-206ENST00000550406 EPYCQ99645 322 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 RNF122Q9H9V4 155 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 NTN4Q9HB63 628 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 TIGARQ9NQ88 270 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 Q9UFV3 132 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 MCTS1Q9ULC4 181 aaKnown RBP11.64□□□□□ -0.55
RAB5C-206ENST00000550406 LYVE1Q9Y5Y7 322 aa11.64□□□□□ -0.55
RAB5C-206ENST00000550406 ENO4A6NNW6 628 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 ZNF716A6NP11 495 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 H3BNX3 289 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 M0R082 166 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 DNPH1O43598 174 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 OR2T1O43869 369 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 TIPRLO75663 272 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 IGF2P01344 180 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 ASAH2BP0C7U1 165 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 RNF224P0DH78 156 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 FUT1P19526 365 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 IFNA8P32881 189 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 IST1P53990 364 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 CTBP2P56545 445 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 FHL1Q13642 323 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 CDSNQ15517 529 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 EXOC3L2Q2M3D2 409 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 FGD3Q5JSP0 725 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 ABLIM2Q6H8Q1 611 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 PPP4R4Q6NUP7 873 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 PAQR6Q6TCH4 344 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 NHLRC1Q6VVB1 395 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 ZNF730Q6ZMV8 503 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 P4HA3Q7Z4N8 544 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 CCDC71Q8IV32 467 aaPredicted RBP11.63□□□□□ -0.55
RAB5C-206ENST00000550406 LIX1LQ8IVB5 337 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 NRMQ8IXM6 262 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 RNF113BQ8IZP6 322 aaKnown RBP11.63□□□□□ -0.55
RAB5C-206ENST00000550406 ZNF417Q8TAU3 575 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 ABHD3Q8WU67 409 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 LIPHQ8WWY8 451 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 INTS12Q96CB8 462 aaKnown RBP11.63□□□□□ -0.55
RAB5C-206ENST00000550406 ALPK1Q96QP1 1244 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 ZNF587Q96SQ5 575 aaPredicted RBP11.63□□□□□ -0.55
RAB5C-206ENST00000550406 GPA33Q99795 319 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 TM9SF2Q99805 663 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 TAPBPLQ9BX59 468 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms