RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 UGT1A5P35504 534 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 PRKXP51817 358 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 PKNOX1P55347 436 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 SRSF5Q13243 272 aaKnown RBP4.49□□□□□ -1.69
HCFC2-204ENST00000550335 PPP1R7Q15435 360 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 KLHL38Q2WGJ6 581 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 GLIPR1L2Q4G1C9 344 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 PRAMEF20Q5VT98 475 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 METTL7BQ6UX53 244 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 ECHDC2Q86YB7 292 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 KCNG3Q8TAE7 436 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 PAQR8Q8TEZ7 354 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 SLITRK2Q9H156 845 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 ZNF385DQ9H6B1 395 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 RAB20Q9NX57 234 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 HOXC10Q9NYD6 342 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 SENP1Q9P0U3 644 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 MDFICQ9P1T7 246 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 ZNF639Q9UID6 485 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 RIMS3Q9UJD0 308 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 ANGPTL2Q9UKU9 493 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 COPS3Q9UNS2 423 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 PLLPQ9Y342 182 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 NWD2Q9ULI1 1742 aa4.49□□□□□ -1.69
HCFC2-204ENST00000550335 MARF1Q9Y4F3 1742 aaKnown RBP4.49□□□□□ -1.69
HCFC2-204ENST00000550335 LOC100131303A0A0U1RQF7 123 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 SMIM28A0A1B0GU29 152 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 TRDCB7Z8K6 153 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 CXCL13O43927 109 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 RAMP3O60896 148 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 CLDN9O95484 217 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 OXSR1O95747 527 aaPredicted RBP4.48□□□□□ -1.69
HCFC2-204ENST00000550335 ZNF883P0CG24 379 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 TROVE2P10155 538 aaKnown RBP eCLIP4.48□□□□□ -1.69
HCFC2-204ENST00000550335 TNNI1P19237 187 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 IGHV1-2P23083 117 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 CHMLP26374 656 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 HNRNPH3P31942 346 aaKnown RBP4.48□□□□□ -1.69
HCFC2-204ENST00000550335 GCKP35557 465 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 DUSP3P51452 185 aaPredicted RBP4.48□□□□□ -1.69
HCFC2-204ENST00000550335 TGM3Q08188 693 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 CD47Q08722 323 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 KLRB1Q12918 225 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 ASAH1Q13510 395 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 GLYR1Q49A26 553 aaPredicted RBP4.48□□□□□ -1.69
HCFC2-204ENST00000550335 UFSP1Q6NVU6 142 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 RNASEKQ6P5S7 137 aaKnown RBP4.48□□□□□ -1.69
HCFC2-204ENST00000550335 HPS6Q86YV9 775 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 OR2L13Q8N349 312 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 C17orf47Q8NEP4 570 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 OR52H1Q8NGJ2 320 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 OR1L6Q8NGR2 347 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 MAGEE2Q8TD90 523 aaPredicted RBP4.48□□□□□ -1.69
HCFC2-204ENST00000550335 ST8SIA1Q92185 356 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 MTMR9Q96QG7 549 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 RNF2Q99496 336 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 RAB34Q9BZG1 259 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 NHEJ1Q9H9Q4 299 aaPredicted RBP4.48□□□□□ -1.69
HCFC2-204ENST00000550335 ZFP14Q9HCL3 533 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 DPM3Q9P2X0 92 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 PISDQ9UG56 409 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 ERVW-1Q9UQF0 538 aa4.48□□□□□ -1.69
HCFC2-204ENST00000550335 COL14A1Q05707 1796 aaKnown RBP4.48□□□□□ -1.69
HCFC2-204ENST00000550335 TTC21BQ7Z4L5 1316 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 RGS12O14924 1447 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 SLIT3O75094 1523 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 CRYBG1Q9Y4K1 1723 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 RALGAPA1Q6GYQ0 2036 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 TCRBV9S1A1TA0A576 114 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 DHRS7CA6NNS2 312 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 PI15O43692 258 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 DFNA5O60443 496 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 NDUFB10O96000 172 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 CCDC166P0CW27 439 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 ATP1B2P14415 290 aaPredicted RBP4.47□□□□□ -1.69
HCFC2-204ENST00000550335 CD80P33681 288 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 GYG1P46976 350 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 QARSP47897 775 aaKnown RBP4.47□□□□□ -1.69
HCFC2-204ENST00000550335 RPS8P62241 208 aaKnown RBP4.47□□□□□ -1.69
HCFC2-204ENST00000550335 CDK16Q00536 496 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 VGLL4Q14135 290 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 MRGPRG-AS1Q2M3A8 158 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 QRICH1Q2TAL8 776 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 C6orf226Q5I0X4 101 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 TRIM69Q86WT6 500 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 CDR2LQ86X02 465 aaPredicted RBP4.47□□□□□ -1.69
HCFC2-204ENST00000550335 CADM2Q8N3J6 435 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 FAM83FQ8NEG4 500 aaPredicted RBP4.47□□□□□ -1.69
HCFC2-204ENST00000550335 OR2L2Q8NH16 312 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 MRPS31Q92665 395 aaKnown RBP4.47□□□□□ -1.69
HCFC2-204ENST00000550335 FGF11Q92914 225 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.47□□□□□ -1.69
HCFC2-204ENST00000550335 IFT74Q96LB3 600 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 RBM4BQ9BQ04 359 aaKnown RBP4.47□□□□□ -1.69
HCFC2-204ENST00000550335 APOL2Q9BQE5 337 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 CENPKQ9BS16 269 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 NMUR2Q9GZQ4 415 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 RBKSQ9H477 322 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 SMYD3Q9H7B4 428 aa4.47□□□□□ -1.69
HCFC2-204ENST00000550335 SPRR3Q9UBC9 169 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms