RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 SPAG7O75391 227 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 ERCC1P07992 297 aaPredicted RBP7.4□□□□□ -1.22
TROAP-208ENST00000548817 CDH2P19022 906 aaPredicted RBP7.4□□□□□ -1.22
TROAP-208ENST00000548817 CXCR1P25024 350 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 MPGP29372 298 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 PGM1P36871 562 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 MAP2K6P52564 334 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 CLNS1AP54105 237 aaKnown RBP7.4□□□□□ -1.22
TROAP-208ENST00000548817 UBE2NP61088 152 aaKnown RBP7.4□□□□□ -1.22
TROAP-208ENST00000548817 LGALS3BPQ08380 585 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 FOXL1Q12952 345 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 MAPK14Q16539 360 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 SMU1Q2TAY7 513 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 TYW3Q6IPR3 259 aaKnown RBP7.4□□□□□ -1.22
TROAP-208ENST00000548817 B3GLCTQ6Y288 498 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 OLIG3Q7RTU3 272 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 AAED1Q7RTV5 226 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 SLC46A3Q7Z3Q1 461 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 PEG10Q86TG7 708 aaKnown RBP7.4□□□□□ -1.22
TROAP-208ENST00000548817 ADGRG3Q86Y34 549 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 NUDCD3Q8IVD9 361 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 CLECL1Q8IZS7 167 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 CLEC4FQ8N1N0 589 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 RIBC1Q8N443 379 aaPredicted RBP7.4□□□□□ -1.22
TROAP-208ENST00000548817 TRIML2Q8N7C3 387 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 WDR31Q8NA23 367 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 POMGNT2Q8NAT1 580 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 MIPOL1Q8TD10 442 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 HPS1Q92902 700 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 RAB8BQ92930 207 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 MRPL24Q96A35 216 aaKnown RBP7.4□□□□□ -1.22
TROAP-208ENST00000548817 ARL5BQ96KC2 179 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 C3orf30Q96M34 536 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 ZIM3Q96PE6 472 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 MECRQ9BV79 373 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 CACYBPQ9HB71 228 aaKnown RBP7.4□□□□□ -1.22
TROAP-208ENST00000548817 OBP2BQ9NPH6 170 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 EXOSC3Q9NQT5 275 aaKnown RBP7.4□□□□□ -1.22
TROAP-208ENST00000548817 TMEM45AQ9NWC5 275 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 MKS1Q9NXB0 559 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 MARCOQ9UEW3 520 aaPredicted RBP7.4□□□□□ -1.22
TROAP-208ENST00000548817 ZDHHC2Q9UIJ5 367 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 KCNE5Q9UJ90 142 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 FBXO9Q9UK97 447 aaPredicted RBP7.4□□□□□ -1.22
TROAP-208ENST00000548817 MOKQ9UQ07 419 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 PCDHGB1Q9Y5G3 927 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 FLVCR1Q9Y5Y0 555 aa7.4□□□□□ -1.22
TROAP-208ENST00000548817 ERICH4A6NGS2 130 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 HMGB1P1B2RPK0 211 aaPredicted RBP7.39□□□□□ -1.23
TROAP-208ENST00000548817 B9A039 149 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 ATP6V1G2-DDX39BF2Z307 99 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 CRYAAP02489 173 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 GPIP06744 558 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 ITGA5P08648 1049 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 NUDT17P0C025 328 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 MYZAPP0CAP1 466 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 IL7RP16871 459 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 TACR3P29371 465 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 SERPINF1P36955 418 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 SLC1A3P43003 542 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 DVL1P1P54792 670 aaPredicted RBP7.39□□□□□ -1.23
TROAP-208ENST00000548817 COPZ1P61923 177 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 TXNL4AP83876 142 aaKnown RBP7.39□□□□□ -1.23
TROAP-208ENST00000548817 DPY19L1Q2PZI1 675 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 OTUD3Q5T2D3 398 aaPredicted RBP7.39□□□□□ -1.23
TROAP-208ENST00000548817 TSPO2Q5TGU0 170 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 TMEM225Q6GV28 225 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 PAQR6Q6TCH4 344 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 SPATA19Q7Z5L4 167 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 GPAT4Q86UL3 456 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 ANKRD46Q86W74 232 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 CMIPQ8IY22 773 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 ZNF440Q8IYI8 595 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 TEX29Q8N6K0 151 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 LINC01356Q8N9X3 169 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 FAM71CQ8NEG0 241 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 OR8J2Q8NGG1 315 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 TCP10LQ8TDR4 215 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 AURKBQ96GD4 344 aaPredicted RBP7.39□□□□□ -1.23
TROAP-208ENST00000548817 TAPBPLQ9BX59 468 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 SAP130Q9H0E3 1048 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 RAB1BQ9H0U4 201 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 SERHL2Q9H4I8 314 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 PIF1Q9H611 641 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 METTL17Q9H7H0 456 aaPredicted RBP7.39□□□□□ -1.23
TROAP-208ENST00000548817 MTHFD2LQ9H903 347 aaPredicted RBP7.39□□□□□ -1.23
TROAP-208ENST00000548817 MOV10Q9HCE1 1003 aaKnown RBP7.39□□□□□ -1.23
TROAP-208ENST00000548817 SLC7A10Q9NS82 523 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 ASIC5Q9NY37 505 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 SLC17A7Q9P2U7 560 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 PCDHB10Q9UN67 800 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 ARFGEF3Q5TH69 2177 aa7.39□□□□□ -1.23
TROAP-208ENST00000548817 CENPVL1A0A0U1RR11 272 aa7.38□□□□□ -1.23
TROAP-208ENST00000548817 TMEM72A0PK05 275 aa7.38□□□□□ -1.23
TROAP-208ENST00000548817 CFAP73A6NFT4 308 aa7.38□□□□□ -1.23
TROAP-208ENST00000548817 OR6C65A6NJZ3 312 aa7.38□□□□□ -1.23
TROAP-208ENST00000548817 ZNF587BE7ETH6 402 aa7.38□□□□□ -1.23
TROAP-208ENST00000548817 PDLIM1O00151 329 aa7.38□□□□□ -1.23
TROAP-208ENST00000548817 KLF11O14901 512 aa7.38□□□□□ -1.23
TROAP-208ENST00000548817 LY6HO94772 140 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms