RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 PLEKHF2Q9H8W4 249 aa13.96□□□□□ -0.17
DDX54-205ENST00000548786 UBTD1Q9HAC8 227 aa13.96□□□□□ -0.17
DDX54-205ENST00000548786 GID8Q9NWU2 228 aa13.96□□□□□ -0.17
DDX54-205ENST00000548786 SELENONQ9NZV5 590 aa13.96□□□□□ -0.17
DDX54-205ENST00000548786 TESQ9UGI8 421 aaKnown RBP13.96□□□□□ -0.17
DDX54-205ENST00000548786 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.95□□□□□ -0.18
DDX54-205ENST00000548786 AQP7P3A6NL99 342 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 CPSF4LA6NMK7 179 aaKnown RBP13.95□□□□□ -0.18
DDX54-205ENST00000548786 GPR171O14626 319 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 TPST2O60704 377 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 COX4I1P13073 169 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 IGHV1-2P23083 117 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 GTF2E2P29084 291 aaKnown RBP13.95□□□□□ -0.18
DDX54-205ENST00000548786 SLC16A1P53985 500 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 EGR4Q05215 589 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 FAPQ12884 760 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 ITGADQ13349 1161 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 SLC17A1Q14916 467 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 PDK3Q15120 406 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 TMEM225Q6GV28 225 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 PAMR1Q6UXH9 720 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 PATL1Q86TB9 770 aaKnown RBP13.95□□□□□ -0.18
DDX54-205ENST00000548786 TREML1Q86YW5 311 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 KDM8Q8N371 416 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 OR4D11Q8NGI4 311 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 OR6T1Q8NGN1 323 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 MCHR1Q99705 422 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 ARHGDIGQ99819 225 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 SH3GL1Q99961 368 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 PTDSS2Q9BVG9 487 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 TMEM27Q9HBJ8 222 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 GMPR2Q9P2T1 348 aaKnown RBP13.95□□□□□ -0.18
DDX54-205ENST00000548786 FLVCR1Q9Y5Y0 555 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 PRR14LQ5THK1 2151 aa13.95□□□□□ -0.18
DDX54-205ENST00000548786 IGKV1D-42A0A075B6H8 117 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 CCDC22O60826 627 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 SHOX2O60902 331 aaPredicted RBP13.94□□□□□ -0.18
DDX54-205ENST00000548786 NPIPB7O75200 414 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 RAD51DO75771 328 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 PPP3CBP16298 524 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 TNFRSF1BP20333 461 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 CD247P20963 164 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 DNASE1P24855 282 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 LSP1P33241 339 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 CRYBA2P53672 197 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 FOXG1P55316 489 aaPredicted RBP13.94□□□□□ -0.18
DDX54-205ENST00000548786 IL1RL1Q01638 556 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 FOXD4Q12950 439 aaPredicted RBP13.94□□□□□ -0.18
DDX54-205ENST00000548786 KEAP1Q14145 624 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 P2RY6Q15077 328 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 TAB1Q15750 504 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 NPTX1Q15818 432 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 INTS11Q5TA45 600 aaKnown RBP13.94□□□□□ -0.18
DDX54-205ENST00000548786 FBXW9Q5XUX1 488 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 ULK3Q6PHR2 472 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 CALHM3Q86XJ0 350 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 SLC30A8Q8IWU4 369 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 LSMEM1Q8N8F7 131 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 BHLHE22Q8NFJ8 381 aaPredicted RBP13.94□□□□□ -0.18
DDX54-205ENST00000548786 OR9K2Q8NGE7 335 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 STK35Q8TDR2 534 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 DNAJA4Q8WW22 397 aaPredicted RBP13.94□□□□□ -0.18
DDX54-205ENST00000548786 TAAR8Q969N4 342 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 PLPPR2Q96GM1 343 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 ZNF385AQ96PM9 386 aaKnown RBP13.94□□□□□ -0.18
DDX54-205ENST00000548786 TEP1Q99973 2627 aaKnown RBP13.94□□□□□ -0.18
DDX54-205ENST00000548786 SLC9A8Q9Y2E8 581 aa13.94□□□□□ -0.18
DDX54-205ENST00000548786 A0A0B4J2E0 115 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 A0A1B0GX12 115 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 A0A1W2PR80 420 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 SLC22A2O15244 555 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 KLF4O43474 513 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 GOSR1O95249 250 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 LGI1O95970 557 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 PLAUP00749 431 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 RAF1P04049 648 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 PNMTP11086 282 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 DRD4P21917 467 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 P2RY4P51582 365 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 CDH12P55289 794 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 GNGT1P63211 74 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 LGALS3BPQ08380 585 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 NRF1Q16656 503 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 LRRC23Q53EV4 343 aaPredicted RBP13.93□□□□□ -0.18
DDX54-205ENST00000548786 C6orf89Q6UWU4 347 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 AAED1Q7RTV5 226 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 CPLX4Q7Z7G2 160 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 C10orf53Q8N6V4 93 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 ZIC4Q8N9L1 334 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 RP9Q8TA86 221 aaKnown RBP13.93□□□□□ -0.18
DDX54-205ENST00000548786 SLC38A4Q969I6 547 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 SLC47A1Q96FL8 570 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 ZNF583Q96ND8 569 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 HDHD5Q9BXW7 423 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 NSRP1Q9H0G5 558 aaKnown RBP13.93□□□□□ -0.18
DDX54-205ENST00000548786 ASB6Q9NWX5 421 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 CMTM6Q9NX76 183 aa13.93□□□□□ -0.18
DDX54-205ENST00000548786 CIB4A0PJX0 185 aa13.92□□□□□ -0.18
DDX54-205ENST00000548786 FTCDNL1E5RQL4 147 aa13.92□□□□□ -0.18
DDX54-205ENST00000548786 LRRN3E7EW58 273 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms