RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 A0A0J9YYE9 177 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 BCLAF3A2AJT9 711 aaKnown RBP3.51□□□□□ -1.85
SCAF11-210ENST00000547654 SMCO2A6NFE2 343 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 GABRR3A8MPY1 467 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.51□□□□□ -1.85
SCAF11-210ENST00000547654 K7ERQ8 282 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 P2RY10O00398 339 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 TRAFD1O14545 582 aaPredicted RBP3.51□□□□□ -1.85
SCAF11-210ENST00000547654 YKT6O15498 198 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 TYROBPO43914 113 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 PCDH7O60245 1069 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 OR2F2O95006 317 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 TGM6O95932 706 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 TRBC1P01850 177 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 MMP1P03956 469 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 P04436 131 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 SERPINA2P20848 420 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 GSTM3P21266 225 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 PRKACBP22694 351 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 FGF9P31371 208 aaPredicted RBP3.51□□□□□ -1.85
SCAF11-210ENST00000547654 IFNA8P32881 189 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 OPRL1P41146 370 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 QARSP47897 775 aaKnown RBP3.51□□□□□ -1.85
SCAF11-210ENST00000547654 UQCRFS1P47985 274 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 RND3P61587 244 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 MTHFSDQ2M296 383 aaKnown RBP3.51□□□□□ -1.85
SCAF11-210ENST00000547654 C14orf177Q52M58 125 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 TEX44Q53QW1 395 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 LIN9Q5TKA1 542 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 MEDAGQ5VYS4 303 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 REP15Q6BDI9 236 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 C3P1Q6ZMU1 363 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 FRRS1Q6ZNA5 592 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 Q6ZSR9 355 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 KLHDC8BQ8IXV7 354 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 TCAIMQ8N3R3 496 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 KIR3DL3Q8N743 410 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 OR2T33Q8NG76 320 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 OR9A1PQ8NGU1 263 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 TRUB1Q8WWH5 349 aaKnown RBP3.51□□□□□ -1.85
SCAF11-210ENST00000547654 PIBF1Q8WXW3 757 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 CNRIP1Q96F85 164 aaPredicted RBP3.51□□□□□ -1.85
SCAF11-210ENST00000547654 PANX2Q96RD6 677 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF300Q96RE9 604 aaPredicted RBP3.51□□□□□ -1.85
SCAF11-210ENST00000547654 ANKRD60Q9BZ19 345 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 GFRA4Q9GZZ7 299 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 RHBGQ9H310 441 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 CHMP4BQ9H444 224 aaKnown RBP3.51□□□□□ -1.85
SCAF11-210ENST00000547654 MOB1AQ9H8S9 216 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF334Q9HCZ1 680 aaPredicted RBP3.51□□□□□ -1.85
SCAF11-210ENST00000547654 CUTCQ9NTM9 273 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 ELOVL2Q9NXB9 296 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 PTTG3PQ9NZH4 202 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 USP16Q9Y5T5 823 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 TRPM2O94759 1503 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 TULP4Q9NRJ4 1543 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 TRBV5-4A0A0C4DH59 114 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 TRABD2BA6NFA1 517 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 TRDCB7Z8K6 153 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 FAM72CH0Y354 149 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 BLOC1S5-TXNDC5H3BN57 136 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 TEX46H3BTG2 121 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 FCN1O00602 326 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 DLGAP1O14490 977 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 BCKDKO14874 412 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 CETN3O15182 167 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 LATO43561 262 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 NMT2O60551 498 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 PFKFB2O60825 505 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 FRAT2O75474 233 aaPredicted RBP3.5□□□□□ -1.85
SCAF11-210ENST00000547654 NXPH4O95158 308 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 HPP00738 406 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 SNRPCP09234 159 aaKnown RBP3.5□□□□□ -1.85
SCAF11-210ENST00000547654 PRSS56P0CW18 603 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 RNF224P0DH78 156 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 SRMP19623 302 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 BCL3P20749 454 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 KITLGP21583 273 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 PRKACGP22612 351 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 STOMP27105 288 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 CD80P33681 288 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 SLC8A3P57103 927 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 RAB10P61026 200 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 SRPXP78539 464 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF33BQ06732 778 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 PPP1R3AQ16821 1122 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 FAM83EQ2M2I3 478 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 CNPY1Q3B7I2 92 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 C1orf220Q5T0J3 134 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 LGSNQ5TDP6 509 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 FAM72AQ5TYM5 149 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 C9orf135Q5VTT2 229 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 PVRIGQ6DKI7 326 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 FAM72DQ6L9T8 149 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 HSDL2Q6YN16 418 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 SCARA5Q6ZMJ2 495 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 PRSS48Q7RTY5 328 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 SLC47A2Q86VL8 602 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 FAM72BQ86X60 149 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 CCDC71Q8IV32 467 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms