RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 LGALS3BPQ08380 585 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 RGNQ15493 299 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 C6orf10Q5SRN2 563 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 RNF220Q5VTB9 566 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 C11orf71Q6IPW1 123 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 SLC22A25Q6T423 547 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 MSANTD1Q6ZTZ1 278 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 AAED1Q7RTV5 226 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 SERPINA11Q86U17 422 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 TMEM45BQ96B21 275 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 MDFIQ99750 246 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 DHRS9Q9BPW9 319 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 SPATA9Q9BWV2 254 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 ALG2Q9H553 416 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 SLC17A5Q9NRA2 495 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 ADPRHL2Q9NX46 363 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 SLC25A37Q9NYZ2 338 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 SLAMF8Q9P0V8 285 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 UPB1Q9UBR1 384 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 DCTN4Q9UJW0 460 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 USH1CQ9Y6N9 552 aa11.7□□□□□ -0.54
CPSF6-204ENST00000547486 A8MVM7 634 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 CLIC1O00299 241 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 FRS3O43559 492 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 SSX4O60224 188 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 NPIPB7O75200 414 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 COPZ1P61923 177 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 PPP2R2BQ00005 443 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 LARS2Q15031 903 aaKnown RBP11.69□□□□□ -0.54
CPSF6-204ENST00000547486 AGAP6Q5VW22 663 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 KLHL17Q6TDP4 642 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 GPAT4Q86UL3 456 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 FUNDC1Q8IVP5 155 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 MSRB3Q8IXL7 192 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 C10orf111Q8N326 155 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 HTRA1Q92743 480 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 C3orf49Q96BT1 292 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 SF3B5Q9BWJ5 86 aaKnown RBP11.69□□□□□ -0.54
CPSF6-204ENST00000547486 CACNG6Q9BXT2 260 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 BCL2L10Q9HD36 194 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 SLC52A3Q9NQ40 469 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 FAIMQ9NVQ4 179 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 PRDM4Q9UKN5 801 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 ZNF232Q9UNY5 417 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 MGAT4BQ9UQ53 548 aa11.69□□□□□ -0.54
CPSF6-204ENST00000547486 TLN2Q9Y4G6 2542 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 HIVEP2P31629 2446 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 TMEM229AB2RXF0 380 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 FTCDNL1E5RQL4 147 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 BMP2P12643 396 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 CDH2P19022 906 aaPredicted RBP11.68□□□□□ -0.54
CPSF6-204ENST00000547486 NCF2P19878 526 aaPredicted RBP11.68□□□□□ -0.54
CPSF6-204ENST00000547486 MPGP29372 298 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 IDH3AP50213 366 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 FABP6P51161 128 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 EGR4Q05215 589 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 HIKESHIQ53FT3 197 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 ZNF311Q5JNZ3 666 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 C1orf140Q5VVS0 124 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 TMEM225Q6GV28 225 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 CREB3L2Q70SY1 520 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 LINGO2Q7L985 606 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 COMTD1Q86VU5 262 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 EPHX4Q8IUS5 362 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 KDM8Q8N371 416 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 MUC15Q8N387 334 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 C17orf78Q8N4C9 275 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 C1orf162Q8NEQ5 155 aaPredicted RBP11.68□□□□□ -0.54
CPSF6-204ENST00000547486 HS6ST2Q96MM7 605 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 EBF4Q9BQW3 602 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 A4GALTQ9NPC4 353 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 SLCO1B3Q9NPD5 702 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 CBLN4Q9NTU7 201 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 THUMPD1Q9NXG2 353 aaKnown RBP11.68□□□□□ -0.54
CPSF6-204ENST00000547486 POU2F3Q9UKI9 436 aa11.68□□□□□ -0.54
CPSF6-204ENST00000547486 IGHV4-30-2A0A087WSY4 118 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 A0A096LPI6 279 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 CRLF1O75462 422 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 UPK3AO75631 287 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 MRPL19P49406 292 aaKnown RBP11.67□□□□□ -0.54
CPSF6-204ENST00000547486 SELENOPP49908 381 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 PRPS1P60891 318 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 ZSWIM7Q19AV6 140 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 PAGE3Q5JUK9 113 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 BLOC1S3Q6QNY0 202 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 POMGNT2Q8NAT1 580 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 OR10H5Q8NGA6 315 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 KTI12Q96EK9 354 aaPredicted RBP11.67□□□□□ -0.54
CPSF6-204ENST00000547486 BOD1Q96IK1 185 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 C7orf26Q96N11 449 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 PTDSS2Q9BVG9 487 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 PRR14Q9BWN1 585 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 TAPBPLQ9BX59 468 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 PIF1Q9H611 641 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 BARX1Q9HBU1 254 aaPredicted RBP11.67□□□□□ -0.54
CPSF6-204ENST00000547486 SEC14L4Q9UDX3 406 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 AMDHD2Q9Y303 409 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 IFT52Q9Y366 437 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 ATP23Q9Y6H3 246 aa11.67□□□□□ -0.54
CPSF6-204ENST00000547486 JMJD1CQ15652 2540 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms