RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 OR5W2Q8NH69 310 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 OMA1Q96E52 524 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 WWTR1Q9GZV5 400 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 GAREM1Q9H706 876 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 BABAM2Q9NXR7 383 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 U3KQA8 63 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 EP300Q09472 2414 aaPredicted RBP10.11□□□□□ -0.79
CUX1-212ENST00000547394 PRR32B1ATL7 298 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 RNF13O43567 381 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 NDUFB5O43674 189 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 SLC2A5P22732 501 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 EPHA8P29322 1005 aaPredicted RBP10.11□□□□□ -0.79
CUX1-212ENST00000547394 FBXW4P57775 412 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 ELAVL1Q15717 326 aaKnown RBP10.11□□□□□ -0.79
CUX1-212ENST00000547394 ODF4Q2M2E3 257 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 FNDC7Q5VTL7 733 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 DUSP19Q8WTR2 217 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 HPS1Q92902 700 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 TAAR8Q969N4 342 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 SLC46A1Q96NT5 459 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 PDCD1LG2Q9BQ51 273 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 TBL1XR1Q9BZK7 514 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 NANSQ9NR45 359 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 OCIAD1Q9NX40 245 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 CMAHPQ9Y471 501 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 HRH3Q9Y5N1 445 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 FRYQ5TBA9 3013 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 RTTNQ86VV8 2226 aa10.11□□□□□ -0.79
CUX1-212ENST00000547394 ANKRD61A6NGH8 418 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 EFCAB7A8K855 629 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 B4DXG7 233 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 TFECO14948 347 aaPredicted RBP10.1□□□□□ -0.79
CUX1-212ENST00000547394 DYRK3O43781 588 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 SLC2A2P11168 524 aaPredicted RBP10.1□□□□□ -0.79
CUX1-212ENST00000547394 APEX1P27695 318 aaKnown RBP10.1□□□□□ -0.79
CUX1-212ENST00000547394 GPR143P51810 404 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 P2RY14Q15391 338 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 ATG4DQ86TL0 474 aaPredicted RBP10.1□□□□□ -0.79
CUX1-212ENST00000547394 GLCCI1Q86VQ1 547 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 ADAMTS18Q8TE60 1221 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 GTPBP2Q9BX10 602 aaKnown RBP10.1□□□□□ -0.79
CUX1-212ENST00000547394 RNF32Q9H0A6 362 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 ACOXLQ9NUZ1 547 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 COPS7AQ9UBW8 275 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 GNG8Q9UK08 70 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 SLC6A5Q9Y345 797 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 A0A1B0GTH9 108 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 SLC22A31A6NKX4 558 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 TAF4O00268 1085 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 OR7A10O76100 309 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 RPP14O95059 124 aaKnown RBP10.1□□□□□ -0.79
CUX1-212ENST00000547394 PAHP00439 452 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 AHCYP23526 432 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 CTXN1P60606 82 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 ZNF45Q02386 682 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 GALEQ14376 348 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 INPP5JQ15735 1006 aaPredicted RBP10.1□□□□□ -0.79
CUX1-212ENST00000547394 IDNKQ5T6J7 187 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 LSM14AQ8ND56 463 aaKnown RBP10.1□□□□□ -0.79
CUX1-212ENST00000547394 NPEPL1Q8NDH3 523 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 HSD17B8Q92506 261 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 LPAR4Q99677 370 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 RAB33BQ9H082 229 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 CRNNQ9UBG3 495 aaPredicted RBP10.1□□□□□ -0.79
CUX1-212ENST00000547394 TBC1D24Q9ULP9 559 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 GSTK1Q9Y2Q3 226 aa10.1□□□□□ -0.79
CUX1-212ENST00000547394 MN1Q10571 1320 aaPredicted RBP10.1□□□□□ -0.79
CUX1-212ENST00000547394 LAMA5O15230 3695 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 TMEM265A0A087WTH1 108 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 IGHV5-10-1A0A0J9YXX1 117 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 A0A1W2PQ09 198 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 IRGMA1A4Y4 181 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 TMEM221A6NGB7 291 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 SCRG1O75711 98 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 IL11P20809 199 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 CLDN6P56747 220 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 GPLD1P80108 840 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 ZNF74Q16587 644 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 RNASE12Q5GAN4 147 aaKnown RBP10.09□□□□□ -0.79
CUX1-212ENST00000547394 WBP2NLQ6ICG8 309 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 ARHGAP11AQ6P4F7 1023 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 CCBE1Q6UXH8 406 aaPredicted RBP10.09□□□□□ -0.79
CUX1-212ENST00000547394 NRARPQ7Z6K4 114 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 ZNF527Q8NB42 609 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 GPR119Q8TDV5 335 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 DNAJA4Q8WW22 397 aaPredicted RBP10.09□□□□□ -0.79
CUX1-212ENST00000547394 CCDC74BQ96LY2 380 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 OR1F2PQ96R84 312 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 PCED1AQ9H1Q7 454 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 ERVMER34-1Q9H9K5 563 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 FABP12A6NFH5 140 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 FRG2CA6NGY1 282 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 TMCC2O75069 709 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 ALOX12BO75342 701 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 IL1AP01583 271 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 HLA-DPB1P04440 258 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 RBM34P42696 430 aaKnown RBP10.09□□□□□ -0.79
CUX1-212ENST00000547394 GRK6P43250 576 aa10.09□□□□□ -0.79
CUX1-212ENST00000547394 RPL18Q07020 188 aaKnown RBP10.09□□□□□ -0.79
CUX1-212ENST00000547394 NKAIN1Q4KMZ8 207 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms