RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 AQP7P3A6NL99 342 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 FAM90A27PA6NNH2 459 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 GPR171O14626 319 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 ARPC2O15144 300 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 TNFRSF1BP20333 461 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 AGTR1P30556 359 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 IFNA8P32881 189 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 P2RY4P51582 365 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 ST3GAL3Q11203 375 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 PIN1Q13526 163 aaPredicted RBP12.89□□□□□ -0.35
DDX54-203ENST00000546869 OR7A5Q15622 319 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 TMEM201Q5SNT2 666 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 PPP4R4Q6NUP7 873 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 VWA1Q6PCB0 445 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 DEF8Q6ZN54 512 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 GDF7Q7Z4P5 450 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 BTLAQ7Z6A9 289 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 TUSC5Q8IXB3 177 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 PIAS4Q8N2W9 510 aaPredicted RBP12.89□□□□□ -0.35
DDX54-203ENST00000546869 CNEP1R1Q8N9A8 125 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 RNASE6Q93091 150 aaKnown RBP12.89□□□□□ -0.35
DDX54-203ENST00000546869 TAAR8Q969N4 342 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 PRRC1Q96M27 445 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 NSMCE2Q96MF7 247 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 PRSS27Q9BQR3 290 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 BTBD10Q9BSF8 475 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 SLC24A3Q9HC58 644 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 ELOVL5Q9NYP7 299 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 EMC3Q9P0I2 261 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 SLC7A7Q9UM01 511 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 A4GNTQ9UNA3 340 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 PROCRQ9UNN8 238 aa12.89□□□□□ -0.35
DDX54-203ENST00000546869 SPTBN1Q01082 2364 aaKnown RBP12.88□□□□□ -0.35
DDX54-203ENST00000546869 SPTAN1Q13813 2472 aaKnown RBP12.88□□□□□ -0.35
DDX54-203ENST00000546869 IGHV3-15A0A0B4J1V0 119 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 LOC102725191A0A1B0GVB3 256 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 GYG2O15488 501 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 MT-ATP6P00846 226 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 SEMG1P04279 462 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 GRNP28799 593 aaKnown RBP12.88□□□□□ -0.35
DDX54-203ENST00000546869 MSX2P35548 267 aaPredicted RBP12.88□□□□□ -0.35
DDX54-203ENST00000546869 RPS5P46782 204 aaKnown RBP12.88□□□□□ -0.35
DDX54-203ENST00000546869 RASSF2P50749 326 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 TAS2R41P59536 307 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 TRAP1Q12931 704 aaKnown RBP12.88□□□□□ -0.35
DDX54-203ENST00000546869 SLC17A1Q14916 467 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 PGM2L1Q6PCE3 622 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 TTC33Q6PID6 262 aaPredicted RBP12.88□□□□□ -0.35
DDX54-203ENST00000546869 ADPRHL1Q8NDY3 354 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 ASB9Q96DX5 294 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 PYURFQ96I23 114 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 C7orf34Q96L11 122 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 NPDC1Q9NQX5 325 aaPredicted RBP12.88□□□□□ -0.35
DDX54-203ENST00000546869 RASD1Q9Y272 281 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 B3GALT5Q9Y2C3 310 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 CORINQ9Y5Q5 1042 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 DOPEY2Q9Y3R5 2298 aa12.88□□□□□ -0.35
DDX54-203ENST00000546869 ZNF814B7Z6K7 855 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 C19orf84I3L1E1 186 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 FFAR1O14842 300 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 CNOT4O95628 575 aaKnown RBP12.87□□□□□ -0.35
DDX54-203ENST00000546869 BGLAPP02818 100 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 KLK2P20151 261 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 SIRPAP78324 504 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 SORDQ00796 357 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 POU4F3Q15319 338 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 IQCCQ4KMZ1 466 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 OTUD3Q5T2D3 398 aaPredicted RBP12.87□□□□□ -0.35
DDX54-203ENST00000546869 LCN8Q6JVE9 175 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 ZNF474Q6S9Z5 364 aaPredicted RBP12.87□□□□□ -0.35
DDX54-203ENST00000546869 WDR88Q6ZMY6 472 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 H1FNTQ75WM6 255 aaPredicted RBP12.87□□□□□ -0.35
DDX54-203ENST00000546869 TSEN54Q7Z6J9 526 aaKnown RBP12.87□□□□□ -0.35
DDX54-203ENST00000546869 GALNT5Q7Z7M9 940 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 KIF18BQ86Y91 864 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 MED12LQ86YW9 2145 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 CCDC103Q8IW40 242 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 OFCC1Q8IZS5 231 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 TMEM99Q8N816 258 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 SCAIQ8N9R8 606 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 RNF217Q8TC41 542 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 ANKRD19PQ9H560 264 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 FANCFQ9NPI8 374 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 PARPBPQ9NWS1 579 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 CLEC4AQ9UMR7 237 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 ENPP4Q9Y6X5 453 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 PTPN13Q12923 2485 aa12.87□□□□□ -0.35
DDX54-203ENST00000546869 ICE1Q9Y2F5 2266 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 EEF1E1-BLOC1S5C9J1V9 151 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 EEF1E1O43324 174 aaKnown RBP12.86□□□□□ -0.35
DDX54-203ENST00000546869 DNAJC8O75937 253 aaPredicted RBP12.86□□□□□ -0.35
DDX54-203ENST00000546869 PRSS23O95084 383 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 AKR7A3O95154 331 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 ITGA2P17301 1181 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 RHCEP18577 417 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 MS4A2Q01362 244 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 LTBQ06643 244 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 TMEM225Q6GV28 225 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 BEND4Q6ZU67 534 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 STK32CQ86UX6 486 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms