RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ACTR3BQ9P1U1 418 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 SLC7A8Q9UHI5 535 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 SH3GLB1Q9Y371 365 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 USP9YO00507 2555 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-211ENST00000546304 A0A0B4J2E0 115 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 A0A1B0GWA3 101 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 A0A1B0GX12 115 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 NPIPA2E9PIF3 369 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 NPIPA3F8WFD2 350 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 H0Y3Z8 333 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 PRRG2O14669 202 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 ACOT8O14734 319 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 ZNHIT1O43257 154 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 SEC14L5O43304 696 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 KLF4O43474 513 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 TPOP07202 933 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 PEPDP12955 493 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF708P17019 499 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 BMP7P18075 431 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 IL11P20809 199 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 TACR3P29371 465 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 SFTPDP35247 375 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 PTGS2P35354 604 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 HTR3AP46098 478 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 OR1E2P47887 323 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 UQCRFS1P47985 274 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 CLDN18P56856 261 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 SELENOWP63302 87 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 MS4A2Q01362 244 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 MRPL49Q13405 166 aaKnown RBP5.69□□□□□ -1.5
PRKDC-211ENST00000546304 ZSCAN26Q16670 478 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 SYT14P1Q58G82 188 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 ALG10BQ5I7T1 473 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 WLSQ5T9L3 541 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 VASNQ6EMK4 673 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 PGM2L1Q6PCE3 622 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF613Q6PF04 617 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 FKBP9P1Q75LS8 142 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 YTHDF3Q7Z739 585 aaKnown RBP5.69□□□□□ -1.5
PRKDC-211ENST00000546304 GGNQ86UU5 652 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 DHFR2Q86XF0 187 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 RBM45Q8IUH3 476 aaKnown RBP5.69□□□□□ -1.5
PRKDC-211ENST00000546304 PM20D2Q8IYS1 436 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 UBQLNLQ8IYU4 475 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 OFCC1Q8IZS5 231 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 Q8N1Y9 231 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 LSMEM1Q8N8F7 131 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 LINC01356Q8N9X3 169 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 FAM57AQ8TBR7 257 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 PHF10Q8WUB8 498 aaKnown RBP5.69□□□□□ -1.5
PRKDC-211ENST00000546304 SLC25A43Q8WUT9 341 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-211ENST00000546304 C3orf49Q96BT1 292 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 PRRC1Q96M27 445 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 LRGUKQ96M69 825 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 KLHL15Q96M94 604 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 MCHR1Q99705 422 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF559Q9BR84 538 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 TRIM2Q9C040 744 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 MMADHCQ9H3L0 296 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-211ENST00000546304 CTPS2Q9NRF8 586 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 RPS6KB2Q9UBS0 482 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 CHRNA9Q9UGM1 479 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 TINAGQ9UJW2 476 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 ACAD8Q9UKU7 415 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 PLA2G2DQ9UNK4 145 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 POMPQ9Y244 141 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 SPIN1Q9Y657 262 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-211ENST00000546304 AP4B1Q9Y6B7 739 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 DOPEY2Q9Y3R5 2298 aa5.69□□□□□ -1.5
PRKDC-211ENST00000546304 TMED7-TICAM2A0A0A6YYA0 188 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 TCRBV5S2A0A599 114 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 DHRS12A0PJE2 317 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 TRAPPC13A5PLN9 417 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 CPSF4LA6NMK7 179 aaKnown RBP5.68□□□□□ -1.5
PRKDC-211ENST00000546304 GJE1A6NN92 205 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 H0YC42 278 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 CHP2O43745 196 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 TPST2O60704 377 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 CIB2O75838 187 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 PRKD3O94806 890 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 OR5F1O95221 314 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 SEMG1P04279 462 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 PNMTP11086 282 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 GNLYP22749 145 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 SHC1P29353 583 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 SLC7A1P30825 629 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 APOBEC1P41238 236 aaKnown RBP5.68□□□□□ -1.5
PRKDC-211ENST00000546304 STARP49675 285 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 CASP6P55212 293 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 TPD52P55327 224 aaPredicted RBP5.68□□□□□ -1.5
PRKDC-211ENST00000546304 CLDN20P56880 219 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 TAS2R41P59536 307 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 VLDLRP98155 873 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 TRAP1Q12931 704 aaKnown RBP5.68□□□□□ -1.5
PRKDC-211ENST00000546304 OR1Q1Q15612 314 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 IGFBP7Q16270 282 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 BCL2A1Q16548 175 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 CTU2Q2VPK5 515 aaKnown RBP5.68□□□□□ -1.5
PRKDC-211ENST00000546304 ACSF3Q4G176 576 aaPredicted RBP5.68□□□□□ -1.5
PRKDC-211ENST00000546304 ENTPD8Q5MY95 495 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms