RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 FAR1Q8WVX9 515 aa14.41□□□□□ -0.1
PRPF40A-212ENST00000545856 OSTF1Q92882 214 aa14.41□□□□□ -0.1
PRPF40A-212ENST00000545856 HIST1H2ACQ93077 130 aa14.41□□□□□ -0.1
PRPF40A-212ENST00000545856 CPNE4Q96A23 557 aaPredicted RBP14.41□□□□□ -0.1
PRPF40A-212ENST00000545856 KTI12Q96EK9 354 aaPredicted RBP14.41□□□□□ -0.1
PRPF40A-212ENST00000545856 ADGRG7Q96K78 797 aa14.41□□□□□ -0.1
PRPF40A-212ENST00000545856 PRDM14Q9GZV8 571 aa14.41□□□□□ -0.1
PRPF40A-212ENST00000545856 C20orf141Q9NUB4 165 aa14.41□□□□□ -0.1
PRPF40A-212ENST00000545856 IL20Q9NYY1 176 aa14.41□□□□□ -0.1
PRPF40A-212ENST00000545856 TMEFF2Q9UIK5 374 aaPredicted RBP14.41□□□□□ -0.1
PRPF40A-212ENST00000545856 HIF3AQ9Y2N7 669 aa14.41□□□□□ -0.1
PRPF40A-212ENST00000545856 CDH10Q9Y6N8 788 aa14.41□□□□□ -0.1
PRPF40A-212ENST00000545856 CACNA1BQ00975 2339 aa14.41□□□□□ -0.1
PRPF40A-212ENST00000545856 LOC102725191A0A1B0GVB3 256 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 UNC119BA6NIH7 251 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 PDLIM1O00151 329 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 KPNA4O00629 521 aaPredicted RBP14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 BMP7P18075 431 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 FUT1P19526 365 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 DAPP51397 102 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 AGFG1P52594 562 aaKnown RBP14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 CLDN18P56856 261 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 PPP1R8Q12972 351 aaKnown RBP14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 TMEM176BQ3YBM2 270 aaPredicted RBP14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 LPCAT4Q643R3 524 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 ZNF620Q6ZNG0 422 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 PRICKLE2Q7Z3G6 844 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 NANOGNBQ7Z5D8 188 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 OAFQ86UD1 273 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 OR5J2Q8NH18 312 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 OR2V1Q8NHB1 315 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 MAGEE2Q8TD90 523 aaPredicted RBP14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 TAAR8Q969N4 342 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 FAM46AQ96IP4 442 aaKnown RBP14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 GPX7Q96SL4 187 aaPredicted RBP14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 SLX1AQ9BQ83 275 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 NAA11Q9BSU3 229 aaPredicted RBP14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 TEX12Q9BXU0 123 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 PRRG3Q9BZD7 231 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 SLC6A15Q9H2J7 730 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 EXO5Q9H790 373 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 BAIAP2Q9UQB8 552 aa14.4□□□□□ -0.1
PRPF40A-212ENST00000545856 BSNQ9UPA5 3926 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 A0A1W2PNV4 684 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 ZC3H12DA2A288 527 aaKnown RBP14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 SHISA8B8ZZ34 492 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 SULT2B1O00204 365 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 CH25HO95992 272 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 HOXD4P09016 255 aaPredicted RBP14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 CELA3AP09093 270 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 APEHP13798 732 aaKnown RBP14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 FUT4P22083 530 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 RPS5P46782 204 aaKnown RBP14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 DIO1P49895 249 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 ZP4Q12836 540 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 ZBED5Q49AG3 693 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 C19orf48Q6RUI8 117 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 SMARCD3Q6STE5 483 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 HS3ST5Q8IZT8 346 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 OR52L1Q8NGH7 329 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 NRG4Q8WWG1 115 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 ARL5BQ96KC2 179 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 OR5B2Q96R09 309 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 NPAS1Q99742 590 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 OR11A1Q9GZK7 315 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 SIGLEC7Q9Y286 467 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 SLC6A5Q9Y345 797 aa14.39□□□□□ -0.11
PRPF40A-212ENST00000545856 H0YAE9 185 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 ATXN7O15265 892 aaPredicted RBP14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 PIP5K1CO60331 668 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 NDUFB2O95178 105 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 IMPDH2P12268 514 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 FCGR2AP12318 317 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 CCNA2P20248 432 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 MAKP20794 623 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 IL11P20809 199 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 PRKACGP22612 351 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 UQCRC1P31930 480 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 SFTPDP35247 375 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 GPR4P46093 362 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 H3F3AP84243 136 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 LAPTM4AQ15012 233 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 POU4F3Q15319 338 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 CTU2Q2VPK5 515 aaKnown RBP14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 TTC23Q5W5X9 447 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 KLHL17Q6TDP4 642 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 H1FNTQ75WM6 255 aaPredicted RBP14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 HDDC2Q7Z4H3 204 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 C10orf53Q8N6V4 93 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 TEX47Q8TBZ9 253 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 ZPLD1Q8TCW7 415 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 UCN2Q96RP3 112 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 TIMP4Q99727 224 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 SLC29A1Q99808 456 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 NIPSNAP1Q9BPW8 284 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 SF3B5Q9BWJ5 86 aaKnown RBP14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 DEFB127Q9H1M4 99 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 GP6Q9HCN6 339 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 CHST11Q9NPF2 352 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 RASD1Q9Y272 281 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms