RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 FAM109AQ8N4B1 249 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 C10orf53Q8N6V4 93 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 LIPHQ8WWY8 451 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 OSTF1Q92882 214 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 HIST1H2ACQ93077 130 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 GTPBP3Q969Y2 492 aaKnown RBP8.59□□□□□ -1.03
YBX3-215ENST00000544504 TAPBPLQ9BX59 468 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 GABARAPL3Q9BY60 117 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 TTTY12Q9BZ98 90 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 PRRG3Q9BZD7 231 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 ZNF703Q9H7S9 590 aaPredicted RBP8.59□□□□□ -1.03
YBX3-215ENST00000544504 FKRPQ9H9S5 495 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 ACKR4Q9NPB9 350 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 TMEFF2Q9UIK5 374 aaPredicted RBP8.59□□□□□ -1.03
YBX3-215ENST00000544504 RAB26Q9ULW5 256 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 HDGFL3Q9Y3E1 203 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 ZNF337Q9Y3M9 751 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 MAGED1Q9Y5V3 778 aaPredicted RBP8.59□□□□□ -1.03
YBX3-215ENST00000544504 AP4B1Q9Y6B7 739 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 NIPBLQ6KC79 2804 aaeCLIP8.58□□□□□ -1.04
YBX3-215ENST00000544504 A0A0G2JMM0 328 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 A0A1W2PPB8 328 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 A0A1W2PRS3 328 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 TMEM72A0PK05 275 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 UNC119BA6NIH7 251 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 KIR3DP1A8MWS1 328 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 KLF4O43474 513 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 DNPH1O43598 174 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 ZIC3O60481 467 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 OR7A10O76100 309 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 CRYABP02511 175 aaKnown RBP8.58□□□□□ -1.04
YBX3-215ENST00000544504 TFPIP10646 304 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 ACADSP16219 412 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 BMP7P18075 431 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 GTF2E2P29084 291 aaKnown RBP8.58□□□□□ -1.04
YBX3-215ENST00000544504 IDUAP35475 653 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 AQP4P55087 323 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 RAC1P63000 192 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 NPRL3Q12980 569 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 IL18R1Q13478 541 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 ESPL1Q14674 2120 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 SLC10A1Q14973 349 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 SYT14P1Q58G82 188 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 C1orf140Q5VVS0 124 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 POMZP3Q6PJE2 187 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.58□□□□□ -1.04
YBX3-215ENST00000544504 OAFQ86UD1 273 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 SETD9Q8NE22 299 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 FAM83FQ8NEG4 500 aaPredicted RBP8.58□□□□□ -1.04
YBX3-215ENST00000544504 OR52L1Q8NGH7 329 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 MFSD8Q8NHS3 518 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 POC1BQ8TC44 478 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 FAM46AQ96IP4 442 aaKnown RBP8.58□□□□□ -1.04
YBX3-215ENST00000544504 SFXN2Q96NB2 322 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 BARD1Q99728 777 aaKnown RBP8.58□□□□□ -1.04
YBX3-215ENST00000544504 ADI1Q9BV57 179 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 ASPNQ9BXN1 380 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 MEPEQ9NQ76 525 aaPredicted RBP8.58□□□□□ -1.04
YBX3-215ENST00000544504 NANSQ9NR45 359 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 ZNF229Q9UJW7 825 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 TRAPPC4Q9Y296 219 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 B3GNT3Q9Y2A9 372 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 CORINQ9Y5Q5 1042 aa8.58□□□□□ -1.04
YBX3-215ENST00000544504 HIVEP3Q5T1R4 2406 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 IGKV1D-42A0A075B6H8 117 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 OR2M5A3KFT3 312 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 C17orf51A8MQB3 221 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 H3BN98 237 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 KPNA4O00629 521 aaPredicted RBP8.57□□□□□ -1.04
YBX3-215ENST00000544504 TFECO14948 347 aaPredicted RBP8.57□□□□□ -1.04
YBX3-215ENST00000544504 SLC16A6O15403 523 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 NPIPB7O75200 414 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 SNAP29O95721 258 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 ACTL6AO96019 429 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 PEPDP12955 493 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 POU2F1P14859 743 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 ZNF24P17028 368 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 FUT1P19526 365 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 CCNA2P20248 432 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 CAPGP40121 348 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 GPR4P46093 362 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 CRISP1P54107 249 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 TPD52P55327 224 aaPredicted RBP8.57□□□□□ -1.04
YBX3-215ENST00000544504 PRPS1P60891 318 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 CSNK2A1P68400 391 aaPredicted RBP8.57□□□□□ -1.04
YBX3-215ENST00000544504 KEAP1Q14145 624 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 BCL2A1Q16548 175 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 ZNF74Q16587 644 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 ZBED5Q49AG3 693 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 NHSL2Q5HYW2 709 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 SMARCD3Q6STE5 483 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 KLHL17Q6TDP4 642 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 GALNT5Q7Z7M9 940 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 MCEMP1Q8IX19 187 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 TMEM251Q8N6I4 163 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 SCAIQ8N9R8 606 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 Q8NA96 180 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 PFN4Q8NHR9 129 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 TEX47Q8TBZ9 253 aa8.57□□□□□ -1.04
YBX3-215ENST00000544504 FANK1Q8TC84 345 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms