RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 OR7A5Q15622 319 aa17■□□□□ 0.31
DDX55-211ENST00000544429 GLYATQ6IB77 296 aa17■□□□□ 0.31
DDX55-211ENST00000544429 RINLQ6ZS11 566 aa17■□□□□ 0.31
DDX55-211ENST00000544429 NUFIP2Q7Z417 695 aaKnown RBP17■□□□□ 0.31
DDX55-211ENST00000544429 LUZP2Q86TE4 346 aa17■□□□□ 0.31
DDX55-211ENST00000544429 CCDC103Q8IW40 242 aa17■□□□□ 0.31
DDX55-211ENST00000544429 MCEMP1Q8IX19 187 aa17■□□□□ 0.31
DDX55-211ENST00000544429 ARHGAP24Q8N264 748 aa17■□□□□ 0.31
DDX55-211ENST00000544429 ZNF610Q8N9Z0 462 aa17■□□□□ 0.31
DDX55-211ENST00000544429 PIGXQ8TBF5 258 aa17■□□□□ 0.31
DDX55-211ENST00000544429 LZICQ8WZA0 190 aa17■□□□□ 0.31
DDX55-211ENST00000544429 TAAR8Q969N4 342 aa17■□□□□ 0.31
DDX55-211ENST00000544429 TPD52L3Q96J77 140 aa17■□□□□ 0.31
DDX55-211ENST00000544429 ZNF300Q96RE9 604 aaPredicted RBP17■□□□□ 0.31
DDX55-211ENST00000544429 RBM24Q9BX46 236 aaKnown RBP17■□□□□ 0.31
DDX55-211ENST00000544429 OPN3Q9H1Y3 402 aaPredicted RBP17■□□□□ 0.31
DDX55-211ENST00000544429 DCAF13Q9NV06 445 aaKnown RBP17■□□□□ 0.31
DDX55-211ENST00000544429 ADPRHL2Q9NX46 363 aa17■□□□□ 0.31
DDX55-211ENST00000544429 TAS2R1Q9NYW7 299 aa17■□□□□ 0.31
DDX55-211ENST00000544429 TRAV36DV7A0A075B6V5 113 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 HNRNPRO43390 633 aaKnown RBP16.99■□□□□ 0.31
DDX55-211ENST00000544429 SMNDC1O75940 238 aaKnown RBP eCLIP16.99■□□□□ 0.31
DDX55-211ENST00000544429 OR5F1O95221 314 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 AHSA1O95433 338 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 NTF4P34130 210 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 RPS5P46782 204 aaKnown RBP16.99■□□□□ 0.31
DDX55-211ENST00000544429 SLC17A1Q14916 467 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 FAM69AQ5T7M9 428 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 TFAP2EQ6VUC0 442 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 MEX3BQ6ZN04 569 aaKnown RBP16.99■□□□□ 0.31
DDX55-211ENST00000544429 TSEN54Q7Z6J9 526 aaKnown RBP16.99■□□□□ 0.31
DDX55-211ENST00000544429 TMEM99Q8N816 258 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 LRRC46Q96FV0 321 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 MPP4Q96JB8 637 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 NAA11Q9BSU3 229 aaPredicted RBP16.99■□□□□ 0.31
DDX55-211ENST00000544429 AMBRA1Q9C0C7 1298 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 SLC7A7Q9UM01 511 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 A4GNTQ9UNA3 340 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 PROCRQ9UNN8 238 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 FBN2P35556 2912 aa16.99■□□□□ 0.31
DDX55-211ENST00000544429 OR2T1O43869 369 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 UBOX5O94941 541 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 PRSS23O95084 383 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 AKR7A3O95154 331 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 THRBP10828 461 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 PEX19P40855 299 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 LTBQ06643 244 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 TMEM201Q5SNT2 666 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 OTUD3Q5T2D3 398 aaPredicted RBP16.98■□□□□ 0.31
DDX55-211ENST00000544429 GDF7Q7Z4P5 450 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 P3H2Q8IVL5 708 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 GEMIN6Q8WXD5 167 aaKnown RBP16.98■□□□□ 0.31
DDX55-211ENST00000544429 FAM162AQ96A26 154 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 SLC41A3Q96GZ6 507 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 SF3B5Q9BWJ5 86 aaKnown RBP16.98■□□□□ 0.31
DDX55-211ENST00000544429 TAPBPLQ9BX59 468 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 SLC19A3Q9BZV2 496 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 ELOVL5Q9NYP7 299 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 SELENONQ9NZV5 590 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 MAGEL2Q9UJ55 1249 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 RIMS3Q9UJD0 308 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 SNX13Q9Y5W8 968 aa16.98■□□□□ 0.31
DDX55-211ENST00000544429 ARPC2O15144 300 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 ZNF682O95780 498 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 BGLAPP02818 100 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 COX6B1P14854 86 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 TCN1P20061 433 aaPredicted RBP16.97■□□□□ 0.31
DDX55-211ENST00000544429 EDNRAP25101 427 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 UQCRC1P31930 480 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 CCKARP32238 428 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 MSX2P35548 267 aaPredicted RBP16.97■□□□□ 0.31
DDX55-211ENST00000544429 CD79BP40259 229 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 OR3A2P47893 321 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 MXRA7P84157 204 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 PIN1Q13526 163 aaPredicted RBP16.97■□□□□ 0.31
DDX55-211ENST00000544429 POU4F3Q15319 338 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 IFI44LQ53G44 452 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 DEF8Q6ZN54 512 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 KIF18BQ86Y91 864 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 ZNF295-AS1Q8N0V1 137 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 FAM86B1Q8N7N1 296 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 ZIC4Q8N9L1 334 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 HSH2DQ96JZ2 352 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 PRRC1Q96M27 445 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 EPYCQ99645 322 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 EMC3Q9P0I2 261 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 RPS6KA6Q9UK32 745 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 PRPF19Q9UMS4 504 aaKnown RBP16.97■□□□□ 0.31
DDX55-211ENST00000544429 FLVCR1Q9Y5Y0 555 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 ITPR2Q14571 2701 aa16.97■□□□□ 0.31
DDX55-211ENST00000544429 CACNA1DQ01668 2161 aa16.96■□□□□ 0.31
DDX55-211ENST00000544429 LOC102725191A0A1B0GVB3 256 aa16.96■□□□□ 0.31
DDX55-211ENST00000544429 GPR171O14626 319 aa16.96■□□□□ 0.31
DDX55-211ENST00000544429 FFAR1O14842 300 aa16.96■□□□□ 0.31
DDX55-211ENST00000544429 VAMP5O95183 116 aa16.96■□□□□ 0.31
DDX55-211ENST00000544429 IGF2P01344 180 aa16.96■□□□□ 0.31
DDX55-211ENST00000544429 SEMG1P04279 462 aa16.96■□□□□ 0.31
DDX55-211ENST00000544429 FUT4P22083 530 aa16.96■□□□□ 0.31
DDX55-211ENST00000544429 RBM34P42696 430 aaKnown RBP16.96■□□□□ 0.31
DDX55-211ENST00000544429 FAM27E3Q08E93 113 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms