RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 RND1Q92730 232 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 KTI12Q96EK9 354 aaPredicted RBP10.91□□□□□ -0.66
DDX55-210ENST00000543016 PTDSS2Q9BVG9 487 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 FKRPQ9H9S5 495 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 MAN2C1Q9NTJ4 1040 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 TMCC3Q9ULS5 477 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 TMEM5Q9Y2B1 443 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 B3GALT5Q9Y2C3 310 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 LOC102725191A0A1B0GVB3 256 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 FTCDNL1E5RQL4 147 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 GPR171O14626 319 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 HNRNPRO43390 633 aaKnown RBP10.9□□□□□ -0.66
DDX55-210ENST00000543016 CYTIPO60759 359 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 FKBP6O75344 327 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 DEAF1O75398 565 aaPredicted RBP10.9□□□□□ -0.66
DDX55-210ENST00000543016 IL18BPO95998 194 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 IMPDH2P12268 514 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 AGAP20933 346 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 FPR1P21462 350 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 RRM2P31350 389 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 CEACAM8P31997 349 aaPredicted RBP10.9□□□□□ -0.66
DDX55-210ENST00000543016 RPS5P46782 204 aaKnown RBP10.9□□□□□ -0.66
DDX55-210ENST00000543016 SPIBQ01892 262 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 CCNIQ14094 377 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 OR7A5Q15622 319 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 ZNF74Q16587 644 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 C1QL3Q5VWW1 255 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 WDR88Q6ZMY6 472 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 FCRLAQ7L513 359 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 MCEMP1Q8IX19 187 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 FNDC9Q8TBE3 224 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 SLC7A13Q8TCU3 470 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 RNF128Q8TEB7 428 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 ASB5Q8WWX0 329 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 TAAR8Q969N4 342 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 SGTBQ96EQ0 304 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 GMPPAQ96IJ6 420 aaPredicted RBP10.9□□□□□ -0.66
DDX55-210ENST00000543016 ZNF845Q96IR2 970 aaPredicted RBP10.9□□□□□ -0.66
DDX55-210ENST00000543016 SF3B5Q9BWJ5 86 aaKnown RBP10.9□□□□□ -0.66
DDX55-210ENST00000543016 ASPNQ9BXN1 380 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 REEP1Q9H902 201 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 RNF122Q9H9V4 155 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 MRPL39Q9NYK5 338 aaKnown RBP10.9□□□□□ -0.66
DDX55-210ENST00000543016 KLHL9Q9P2J3 617 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 DNAJB9Q9UBS3 223 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 ZNF229Q9UJW7 825 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 RASD1Q9Y272 281 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 AP4S1Q9Y587 144 aa10.9□□□□□ -0.66
DDX55-210ENST00000543016 SMG1Q96Q15 3661 aaKnown RBP10.9□□□□□ -0.66
DDX55-210ENST00000543016 A0A087WUU8 490 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 AQP7P3A6NL99 342 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 ZNF724A8MTY0 619 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 TNFRSF11BO00300 401 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 GNGT2O14610 69 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 ZNHIT1O43257 154 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 LRRTM2O43300 516 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 DIRAS1O95057 198 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 CST1P01037 141 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 HIST1H2ABP04908 130 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 UQCRFS1P47985 274 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 SLC9A3P48764 834 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 ARHGDIAP52565 204 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 SLC16A1P53985 500 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 PRKCDQ05655 676 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 PMPCAQ10713 525 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 TAF11Q15544 211 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 FGD3Q5JSP0 725 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 PODNL1Q6PEZ8 512 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 H1FNTQ75WM6 255 aaPredicted RBP10.89□□□□□ -0.67
DDX55-210ENST00000543016 HIST3H2AQ7L7L0 130 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 C10orf53Q8N6V4 93 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 TMEM255BQ8WV15 326 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 HIST1H2ACQ93077 130 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 ALPK1Q96QP1 1244 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 FUZQ9BT04 418 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 SFXN3Q9BWM7 321 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 SRXN1Q9BYN0 137 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 DENND2DQ9H6A0 471 aaPredicted RBP10.89□□□□□ -0.67
DDX55-210ENST00000543016 MEPEQ9NQ76 525 aaPredicted RBP10.89□□□□□ -0.67
DDX55-210ENST00000543016 NANSQ9NR45 359 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 COQ3Q9NZJ6 369 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 EMC3Q9P0I2 261 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 RHCGQ9UBD6 479 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 ZNF629Q9UEG4 869 aaPredicted RBP10.89□□□□□ -0.67
DDX55-210ENST00000543016 SH3BGRL2Q9UJC5 107 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 ERRFI1Q9UJM3 462 aaPredicted RBP10.89□□□□□ -0.67
DDX55-210ENST00000543016 TESMINQ9Y4I5 508 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 LYVE1Q9Y5Y7 322 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 HIVEP3Q5T1R4 2406 aa10.89□□□□□ -0.67
DDX55-210ENST00000543016 MYO7BQ6PIF6 2116 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 IGKV3D-15A0A087WSY6 115 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 SH3PXD2BA1X283 911 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 SMAD9O15198 467 aaKnown RBP10.88□□□□□ -0.67
DDX55-210ENST00000543016 OR7A10O76100 309 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 TGM6O95932 706 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 PLGP00747 810 aaPredicted RBP10.88□□□□□ -0.67
DDX55-210ENST00000543016 LDLRP01130 860 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 BGLAPP02818 100 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 IFI30P13284 250 aa10.88□□□□□ -0.67
DDX55-210ENST00000543016 FUT1P19526 365 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms