RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 SPHK2Q9NRA0 654 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 MMP26Q9NRE1 261 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 UBQLN4Q9NRR5 601 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 PNO1Q9NRX1 252 aaKnown RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 MRPL22Q9NWU5 206 aaKnown RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 NDUFB11Q9NX14 153 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 TAS2R14Q9NYV8 317 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 RBPJLQ9UBG7 517 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 PEF1Q9UBV8 284 aaKnown RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 HSPB7Q9UBY9 170 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 ZDHHC2Q9UIJ5 367 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 LEF1Q9UJU2 399 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 TSPAN16Q9UKR8 245 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 GABRQQ9UN88 632 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 FLVCR1Q9Y5Y0 555 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 CLCA3PQ9Y6N3 262 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 DICER1Q9UPY3 1922 aaKnown RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 SLX4Q8IY92 1834 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 SCN9AQ15858 1988 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 MAST2Q6P0Q8 1798 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 TRAV39A0A0B4J263 110 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 SCO2A0A1W2PP80 73 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 OR2M5A3KFT3 312 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 CPED1A4D0V7 1026 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 CLEC18AA5D8T8 446 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 CXorf65A6NEN9 183 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 ANKRD61A6NGH8 418 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 UNC119BA6NIH7 251 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 ISM1B1AKI9 464 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 NPIPA7E9PJI5 369 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 M0R3H8 397 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 GTPBP1O00178 669 aaKnown RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 MFNGO00587 321 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 UBFD1O14562 309 aaKnown RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 SMAD9O15198 467 aaKnown RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 MAGEB4O15481 346 aaPredicted RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 FGF16O43320 207 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 EMC8O43402 210 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 RNF13O43567 381 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 SYT7O43581 403 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 SRPX2O60687 465 aaPredicted RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 WDR1O75083 606 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 FZD7O75084 574 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 EEDO75530 441 aaKnown RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 ANXA9O76027 345 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 NDUFB10O96000 172 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 TFP02787 698 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 ALDOAP04075 364 aaKnown RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 C8AP07357 584 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 NPSP0C0P6 89 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 UQCRFS1P1P0C7P4 283 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 TBC1D3HP0C7X1 549 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 NPIPA8P0DM63 369 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 F3P13726 295 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 HLA-GP17693 338 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 SRMP19623 302 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 CXCL2P19875 107 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 MAKP20794 623 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 IL11P20809 199 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 FPR1P21462 350 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 MPGP29372 298 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 RBMS1P29558 406 aaKnown RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 C21orf33P30042 268 aaPredicted RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 FGF9P31371 208 aaPredicted RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 CD80P33681 288 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 PIGAP37287 484 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 TAGLN2P37802 199 aaKnown RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 RFX3P48380 749 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 GSK3BP49841 420 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 KHKP50053 298 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 LUMP51884 338 aaPredicted RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 DLX5P56178 289 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 RGS8P57771 180 aaPredicted RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 YBEYP58557 167 aaPredicted RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 DCAF7P61962 342 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 PSG6Q00889 435 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 SLC6A3Q01959 620 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 NAAAQ02083 359 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 IRF8Q02556 426 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 SLC10A7Q0GE19 358 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 MLLT11Q13015 90 aaPredicted RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 MTAPQ13126 283 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 SKP2Q13309 424 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 VEZF1Q14119 521 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 KIAA0141Q14154 515 aaPredicted RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 ODF1Q14990 250 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 RBMS2Q15434 407 aaKnown RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 NTRK2Q16620 822 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 DECR1Q16698 335 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 CPEB4Q17RY0 729 aaKnown RBP eCLIP4□□□□□ -1.772e-6■■■■■ 41.6
SNHG1-219ENST00000542112 C5orf64Q2M2E5 130 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 UNC50Q53HI1 259 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 ARL13AQ5H913 290 aaPredicted RBP4□□□□□ -1.77
SNHG1-219ENST00000542112 TMEM255AQ5JRV8 349 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 ELFN2Q5R3F8 820 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 ARTNQ5T4W7 220 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 BCL2L15Q5TBC7 163 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 PRAMEF9Q5VWM5 478 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 LIPKQ5VXJ0 399 aa4□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF57Q68EA5 555 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms