RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 SLC35D3Q5M8T2 416 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 RBMS3Q6XE24 437 aaKnown RBP13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 HSD11B1LQ7Z5J1 315 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 OR51Q1Q8NH59 317 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 ZNF681Q96N22 645 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 CRB3Q9BUF7 120 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 FBRSQ9HAH7 460 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 SIDT1Q9NXL6 827 aaKnown RBP13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 NDRG3Q9UGV2 375 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 NRXN3Q9Y4C0 1643 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 STMND1H3BQB6 276 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 BRINP1O60477 761 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 KCNJ10P78508 379 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 SYT14P1Q58G82 188 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 METTL27Q8N6F8 245 aaPredicted RBP13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 PEX11GQ96HA9 241 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 OR1F2PQ96R84 312 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 SPNS1Q9H2V7 528 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 RHOP08100 348 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 NAGAP17050 411 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 CHRNEQ04844 493 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 CD300LGQ6UXG3 332 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 UNQ6126/PRO20091Q6UXV3 157 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 NLGN4XQ8N0W4 816 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 PLPP5Q8NEB5 264 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 DTD2Q96FN9 168 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 NIPSNAP3BQ9BS92 247 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 KLF16Q9BXK1 252 aaPredicted RBP13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 LHX3Q9UBR4 397 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 NUMBLQ9Y6R0 609 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 TMEM269A0A1B0GVZ9 245 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 ZAR1LA6NP61 321 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 STK17BO94768 372 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 CSF3P09919 207 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 EXOSC2Q13868 293 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 RAB33AQ14088 237 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 HEPHL1Q6MZM0 1159 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 DOK4Q8TEW6 326 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 CHTF18Q8WVB6 975 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 SEC22AQ96IW7 307 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 SLC6A20Q9NP91 592 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 ACKR4Q9NPB9 350 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 TIMM8BQ9Y5J9 83 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 SCGB1D1O95968 90 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 GABRB1P18505 474 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 AANATQ16613 207 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 FAM160A2Q8N612 972 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 OR52H1Q8NGJ2 320 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 SRRQ9GZT4 340 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 MSTNO14793 375 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 IL33O95760 270 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 POU3F3P20264 500 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 ITGB7P26010 798 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 RGRP47804 291 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 FOXK2Q01167 660 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 GAB1Q13480 694 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 ZNF266Q14584 549 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 EBPQ15125 230 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 CTF1Q16619 201 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 B3GLCTQ6Y288 498 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 SLCO4C1Q6ZQN7 724 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 ZFP82Q8N141 532 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 ZBTB44Q8NCP5 570 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 DOK1Q99704 481 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 RBM38Q9H0Z9 239 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 OR10A5Q9H207 317 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 OR10A2Q9H208 303 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 ATXN7L1Q9ULK2 861 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 TTLL8A6PVC2 850 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 TAAR5O14804 337 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 OR8G3PP0DMU2 310 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 CPMP14384 443 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 EPHA1P21709 976 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 IMPA1P29218 277 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 MRPL2Q5T653 305 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 OR1M1Q8NGA1 313 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 UBE2FQ969M7 185 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 SGIP1Q9BQI5 828 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 ALG12Q9BV10 488 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 SCPEP1Q9HB40 452 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 EXOSC3Q9NQT5 275 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 GOLGA4Q13439 2230 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 LTBP3Q9NS15 1303 aa13.92□□□□□ -0.18
SMARCA4-207ENST00000541122 C5P01031 1676 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 A0A0A6YYJ9 748 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 LOC100289279A0A1B0GTE1 492 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 SNRPGP15A8MWD9 76 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 TGOLN2O43493 480 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 SLC16A7O60669 478 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 TMEM127O75204 238 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 EVX1P49640 407 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 GPM6BQ13491 265 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 USP51Q70EK9 711 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 C14orf79Q96F83 325 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 OCSTAMPQ9BR26 566 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 LIN7BQ9HAP6 207 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 GJE1A6NN92 205 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 SMAD6O43541 496 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 SERPINA7P05543 415 aa13.91□□□□□ -0.18
SMARCA4-207ENST00000541122 NR0B1P51843 470 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms