RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 CDK2P24941 298 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 RPL4P36578 427 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 VASPP50552 380 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 RAB14P61106 215 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 TNFRSF17Q02223 184 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 TFF2Q03403 129 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 DUSP8Q13202 625 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 TMEM44Q2T9K0 475 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 SLC35F2Q8IXU6 374 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 ZNF619Q8N2I2 560 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 RAB42Q8N4Z0 105 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 RELL2Q8NC24 303 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR51A4Q8NGJ6 313 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR14C36Q8NHC7 312 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 SYNPRQ8TBG9 265 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 DVL3Q92997 716 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 TSACCQ96A04 125 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 Q96M85 177 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 KLHL15Q96M94 604 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 ZNF350Q9GZX5 532 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 SDHAF2Q9NX18 166 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 POMT2Q9UKY4 750 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 MOKQ9UQ07 419 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 MAB21L2Q9Y586 359 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 FXYD6-FXYD2A0A087WZ82 144 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 PYCARD-AS1I3L0S3 204 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 STX11O75558 287 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 RCBTB2O95199 551 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 IGF2P01344 180 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 IGKV1D-16P01601 117 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 MAS1P04201 325 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 HOXD4P09016 255 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 GAAP10253 952 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 ICAM2P13598 275 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 SRMP19623 302 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 PSMB1P20618 241 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 HSD17B2P37059 387 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 CSRP2Q16527 193 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 ALG10BQ5I7T1 473 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 ATRAIDQ6UW56 229 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 TPRA1Q86W33 373 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 GRAMD2AQ8IUY3 354 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 GPALPP1Q8IXQ4 340 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 MFSD9Q8NBP5 474 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 C1orf216Q8TAB5 229 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 KLHDC3Q9BQ90 382 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 JAM3Q9BX67 310 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 TEX101Q9BY14 249 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 B3GNT4Q9C0J1 378 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 FXYD6Q9H0Q3 95 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 CERS4Q9HA82 394 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 NCDNQ9UBB6 729 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 TVP23AA6NH52 213 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 C17orf51A8MQB3 221 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 H3BUI4 141 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 L7N2F9 121 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 PTP4A3O75365 173 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 ATP1B1P05026 303 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 VSIG10L2P0DP72 767 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 ADRA2CP18825 462 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 PTH2RP49190 550 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 PSMA6P60900 246 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 ARHGEF6Q15052 776 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 ZNF425Q6IV72 752 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 KIRREL2Q6UWL6 708 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 CDK20Q8IZL9 346 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR6M1Q8NGM8 313 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR8S1Q8NH09 359 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 MYEF2Q9P2K5 600 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 FBXL2Q9UKC9 423 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 ACSL5Q9ULC5 683 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 CAMK2AQ9UQM7 478 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 SLC27A6Q9Y2P4 619 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 FKBP7Q9Y680 259 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 FRYLO94915 3013 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 A0A1W2PQU0 124 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 PCP4L1A6NKN8 68 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 DUXAA6NLW8 204 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 C1QTNF3-AMACRE9PGA6 284 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 KHNYNO15037 678 aaKnown RBP9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 RLN1P04808 185 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 M6PRP20645 277 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 CMPK1P30085 196 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 IGFALSP35858 605 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 EFNB2P52799 333 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 H2BFSP57053 126 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 NOGQ13253 232 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 ERV3-1Q14264 604 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 CST6Q15828 149 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 FAM74A1Q5RGS3 127 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 TMEM69Q5SWH9 247 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 PRAMEF8Q5VWM4 474 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 PRAMEF7Q5VXH5 474 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 MAMSTRQ6ZN01 415 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 PRSS42Q7Z5A4 293 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 MEIOBQ8N635 442 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 TTLQ8NG68 377 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 MOAP1Q96BY2 351 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 LMF1Q96S06 567 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 MICU1Q9BPX6 476 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms