RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 CACNG3O60359 315 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 SURF6O75683 361 aaKnown RBP3.81□□□□□ -1.8
YBX3-210ENST00000540975 FGF4P08620 206 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 PRKACAP17612 351 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 VDAC1P21796 283 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 GLRA2P23416 452 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 RABIFP47224 123 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 LIM2P55344 173 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 EIF3EP60228 445 aaKnown RBP3.81□□□□□ -1.8
YBX3-210ENST00000540975 RND3P61587 244 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 DNAJC3Q13217 504 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 CHIT1Q13231 466 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 ITGB3BPQ13352 177 aaPredicted RBP3.81□□□□□ -1.8
YBX3-210ENST00000540975 ARHGAP19Q14CB8 494 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 KCTD21Q4G0X4 260 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 EOGTQ5NDL2 527 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 OR6B2Q6IFH4 312 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 CYS1Q717R9 158 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 RABEPKQ7Z6M1 372 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 SLC51BQ86UW2 128 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 C17orf82Q86X59 251 aaPredicted RBP3.81□□□□□ -1.8
YBX3-210ENST00000540975 ST13P4Q8IZP2 240 aaPredicted RBP3.81□□□□□ -1.8
YBX3-210ENST00000540975 CCDC71LQ8N9Z2 235 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 CLHC1Q8NHS4 586 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 CEP19Q96LK0 163 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 SMIM14Q96QK8 99 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 SELENOSQ9BQE4 189 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 ERP44Q9BS26 406 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 TBC1D10AQ9BXI6 508 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 CRNKL1Q9BZJ0 848 aaKnown RBP3.81□□□□□ -1.8
YBX3-210ENST00000540975 COMMD4Q9H0A8 199 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 HSD3B7Q9H2F3 369 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 CAB39LQ9H9S4 337 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 PARVBQ9HBI1 364 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 SLC35D1Q9NTN3 355 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 NUDT15Q9NV35 164 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 SLC7A8Q9UHI5 535 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 CDC42BPAQ5VT25 1732 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 ADGBQ8N7X0 1667 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 EIF2AK4Q9P2K8 1649 aaKnown RBP3.81□□□□□ -1.8
YBX3-210ENST00000540975 CCDC141Q6ZP82 1450 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 MSH6P52701 1360 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 ARHGAP42A6NI28 874 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 E9PBE3 544 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 GOLGA8RI6L899 631 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 RAD51BO15315 384 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 BIRC5O15392 142 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 GPX5O75715 221 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 BCAS2O75934 225 aaPredicted RBP3.8□□□□□ -1.8
YBX3-210ENST00000540975 ATP5HO75947 161 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 APOEP02649 317 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 OR8U8P0C7N1 319 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 GSTT2P0CG29 244 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 GSTT2BP0CG30 244 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 CCDC192P0DO97 292 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 CALM1P0DP23 149 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 CALM2P0DP24 149 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 CALM3P0DP25 149 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 RALAP11233 206 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 IGLL1P15814 213 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 ALDH3A1P30838 453 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 CAMLGP49069 296 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 SERPINB8P50452 374 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 PRRX1P54821 245 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 GMFBP60983 142 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 TSPAN5P62079 268 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 RPL8P62917 257 aaKnown RBP3.8□□□□□ -1.8
YBX3-210ENST00000540975 S100A12P80511 92 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 LIPEQ05469 1076 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 SMARCB1Q12824 385 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 DYNC1I2Q13409 638 aaKnown RBP3.8□□□□□ -1.8
YBX3-210ENST00000540975 ZNF589Q86UQ0 364 aaPredicted RBP3.8□□□□□ -1.8
YBX3-210ENST00000540975 ZNF100Q8IYN0 542 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 BBS5Q8N3I7 341 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 TCAIMQ8N3R3 496 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 HDDC3Q8N4P3 179 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 ANKFN1Q8N957 763 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 DCAF4L2Q8NA75 395 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 RAB7BQ96AH8 199 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 TMA16Q96EY4 203 aaKnown RBP3.8□□□□□ -1.8
YBX3-210ENST00000540975 TSNARE1Q96NA8 513 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 SHCBP1LQ9BZQ2 653 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 FAM107BQ9H098 131 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 ATG10Q9H0Y0 220 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 KAT8Q9H7Z6 458 aaKnown RBP3.8□□□□□ -1.8
YBX3-210ENST00000540975 COG4Q9H9E3 785 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 TAS2R7Q9NYW3 318 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 TMCO1Q9UM00 188 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 CHMP2BQ9UQN3 213 aa3.8□□□□□ -1.8
YBX3-210ENST00000540975 CDK13Q14004 1512 aaKnown RBP3.8□□□□□ -1.8
YBX3-210ENST00000540975 PLA2R1Q13018 1463 aa3.79□□□□□ -1.8
YBX3-210ENST00000540975 ABCC10Q5T3U5 1492 aa3.79□□□□□ -1.8
YBX3-210ENST00000540975 ARID1AO14497 2285 aa3.79□□□□□ -1.8
YBX3-210ENST00000540975 POLR3AO14802 1390 aaPredicted RBP3.79□□□□□ -1.8
YBX3-210ENST00000540975 RNF103-CHMP3A0A140T963 221 aa3.79□□□□□ -1.8
YBX3-210ENST00000540975 SERTM2A0A1B0GWG4 89 aa3.79□□□□□ -1.8
YBX3-210ENST00000540975 CFAP73A6NFT4 308 aa3.79□□□□□ -1.8
YBX3-210ENST00000540975 TUBAL3A6NHL2 446 aa3.79□□□□□ -1.8
YBX3-210ENST00000540975 K7ERQ8 282 aa3.79□□□□□ -1.8
YBX3-210ENST00000540975 KMOO15229 486 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms