RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 NDEL1Q9GZM8 345 aa15.7■□□□□ 0.1
CLSTN3-210ENST00000540931 COQ10BQ9H8M1 238 aa15.7■□□□□ 0.1
CLSTN3-210ENST00000540931 FANCFQ9NPI8 374 aa15.7■□□□□ 0.1
CLSTN3-210ENST00000540931 CCM2LQ9NUG4 571 aaPredicted RBP15.7■□□□□ 0.1
CLSTN3-210ENST00000540931 TNFRSF10DQ9UBN6 386 aa15.7■□□□□ 0.1
CLSTN3-210ENST00000540931 ERRFI1Q9UJM3 462 aaPredicted RBP15.7■□□□□ 0.1
CLSTN3-210ENST00000540931 AURKCQ9UQB9 309 aa15.7■□□□□ 0.1
CLSTN3-210ENST00000540931 LIPT2A6NK58 231 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 GADD45GO95257 159 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 PLGP00747 810 aaPredicted RBP15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 CEACAM8P31997 349 aaPredicted RBP15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 ARHGDIAP52565 204 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 ZFP1Q6P2D0 407 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 ZNF730Q6ZMV8 503 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 FCRLAQ7L513 359 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 FJX1Q86VR8 437 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 PAPD5Q8NDF8 572 aaKnown RBP15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 DUS3LQ96G46 650 aaKnown RBP15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 ARL5BQ96KC2 179 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 DHRS1Q96LJ7 313 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 SFXN3Q9BWM7 321 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 FKRPQ9H9S5 495 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 C6orf203Q9P0P8 240 aaPredicted RBP15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 ZNF229Q9UJW7 825 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 RASD1Q9Y272 281 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 EMC9Q9Y3B6 208 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 FAM215AQ9Y5M1 114 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 V9GYQ6 96 aa15.69■□□□□ 0.1
CLSTN3-210ENST00000540931 A0A1W2PNR3 127 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 hCG_2039718K7EN88 272 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 GNGT2O14610 69 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 DVL2O14641 736 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 HNRNPRO43390 633 aaKnown RBP15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 GLI4P10075 376 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 FPR1P21462 350 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 CTSSP25774 331 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 RRM2P31350 389 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 RPS5P46782 204 aaKnown RBP15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 UQCRFS1P47985 274 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 HMGA2P52926 109 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 ACTR3P61158 418 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 H3F3AP84243 136 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 EGR4Q05215 589 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 PMPCAQ10713 525 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 TMEM225Q6GV28 225 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 RTL6Q6ICC9 239 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 OR2T5Q6IEZ7 315 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 ADGRG5Q8IZF4 528 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 FAM86B1Q8N7N1 296 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 OR2T29Q8NH02 315 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 RNF128Q8TEB7 428 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 CANT1Q8WVQ1 401 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 LIPHQ8WWY8 451 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 PRSS27Q9BQR3 290 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 PRR14Q9BWN1 585 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 CHID1Q9BWS9 393 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 OR11A1Q9GZK7 315 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 PIGMQ9H3S5 423 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 REEP1Q9H902 201 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 NANSQ9NR45 359 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 ARMC1Q9NVT9 282 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 PARPBPQ9NWS1 579 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 SH3BGRL2Q9UJC5 107 aa15.68■□□□□ 0.1
CLSTN3-210ENST00000540931 LOC102725191A0A1B0GVB3 256 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 ZNF724A8MTY0 619 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 CYTIPO60759 359 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 DEAF1O75398 565 aaPredicted RBP15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 PRSS23O95084 383 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 CST1P01037 141 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 NQO1P15559 274 aaKnown RBP15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 CHRNB4P30926 498 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 SLC9A3P48764 834 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 CTBP2P56545 445 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 SPIBQ01892 262 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 OR7A5Q15622 319 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 TMEM201Q5SNT2 666 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 PPP4R4Q6NUP7 873 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 MBOAT2Q6ZWT7 520 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 H1FNTQ75WM6 255 aaPredicted RBP15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 ZNF808Q8N4W9 903 aaPredicted RBP15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 C10orf53Q8N6V4 93 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 FNDC9Q8TBE3 224 aa15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 PHF3Q92576 2039 aaKnown RBP15.67■□□□□ 0.1
CLSTN3-210ENST00000540931 IGKV1D-42A0A075B6H8 117 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 ZC3H12DA2A288 527 aaKnown RBP15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 AQP7P3A6NL99 342 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 FFAR1O14842 300 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 AKAP8O43823 692 aaKnown RBP15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 SEMA7AO75326 666 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 AGFG2O95081 481 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 OR6A2O95222 327 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 LYPD3O95274 346 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 OPN1LWP04000 364 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 THY1P04216 161 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 TMIGD3P0DMS9 266 aaPredicted RBP15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 IMPDH2P12268 514 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 SHC1P29353 583 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 YAP1P46937 504 aaKnown RBP15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 SLC16A1P53985 500 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 PRKCDQ05655 676 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms