RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SLC6A16Q9GZN6 736 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 SLC6A15Q9H2J7 730 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 Q9N2J8 555 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 DMRT3Q9NQL9 472 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 STARD5Q9NSY2 213 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ACTR10Q9NZ32 417 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 EMC3Q9P0I2 261 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ASH2LQ9UBL3 628 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 DHCR7Q9UBM7 475 aaKnown RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 CTSFQ9UBX1 484 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 RASD1Q9Y272 281 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 SIT1Q9Y3P8 196 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 NPTNQ9Y639 398 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 CKAP5Q14008 2032 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 PTPRQQ9UMZ3 2332 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 RIIAD1A6NNX1 92 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 L7N2F9 121 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 PGRMC2O15173 223 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 DUX1O43812 170 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 RPP14O95059 124 aaKnown RBP4.84□□□□□ -1.63
PROM1-220ENST00000540805 AKR7A3O95154 331 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 DRD2P14416 443 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 IMPA1P29218 277 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 OMPP47874 163 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 FNTBP49356 437 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 ZNF124Q15973 351 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 CCSMST1Q4G0I0 132 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 NHLRC3Q5JS37 347 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 TCTE1Q5JU00 501 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 SFXN4Q6P4A7 337 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 NR2C2APQ86WQ0 139 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 MEX3DQ86XN8 651 aaKnown RBP4.84□□□□□ -1.63
PROM1-220ENST00000540805 KLHDC8AQ8IYD2 350 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 ZNF687Q8N1G0 1237 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 ZNF611Q8N823 705 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 ZNF527Q8NB42 609 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 OR4D10Q8NGI6 311 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 OR56A3Q8NH54 315 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 OR56B4Q8NH76 319 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 SPPL3Q8TCT6 385 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 GNPDA2Q8TDQ7 276 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 TSEN15Q8WW01 171 aaKnown RBP4.84□□□□□ -1.63
PROM1-220ENST00000540805 NEIL2Q969S2 332 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 ELMOD3Q96FG2 381 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 NARS2Q96I59 477 aaKnown RBP4.84□□□□□ -1.63
PROM1-220ENST00000540805 SFXN2Q96NB2 322 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 LYSMD1Q96S90 227 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 ABHD1Q96SE0 405 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 DDOQ99489 341 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 GPA33Q99795 319 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 WFDC6Q9BQY6 131 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 SDHAF3Q9NRP4 125 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 MED9Q9NWA0 146 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 OR6C2Q9NZP2 312 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 TAAR2Q9P1P5 351 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 RARRES3Q9UL19 164 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 LIPT1Q9Y234 373 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 DOCK10Q96BY6 2186 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 EFCAB7A8K855 629 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 C11orf98E9PRG8 122 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 FOXE1O00358 373 aaPredicted RBP4.84□□□□□ -1.63
PROM1-220ENST00000540805 SCDO00767 359 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 PDCD5O14737 125 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 FZD7O75084 574 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 MT-ND4P03905 459 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 ALDOBP05062 364 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 RAB3AP20336 220 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 RAB3BP20337 219 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 ATP5A1P25705 553 aaKnown RBP4.84□□□□□ -1.63
PROM1-220ENST00000540805 SHC1P29353 583 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 MNDAP41218 407 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 CSNK1DP48730 415 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 CTSCP53634 463 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 ZP1P60852 638 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 SHC2P98077 582 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 PITPNAQ00169 270 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 ZCCHC12Q6PEW1 402 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 ZNF322Q6U7Q0 402 aaPredicted RBP4.84□□□□□ -1.63
PROM1-220ENST00000540805 SLCO4C1Q6ZQN7 724 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 RANBP3LQ86VV4 465 aaPredicted RBP4.84□□□□□ -1.63
PROM1-220ENST00000540805 MMP21Q8N119 569 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 EID2Q8N6I1 236 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 FRMD1Q8N878 549 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 PHOSPHO2Q8TCD6 241 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 OR5P2Q8WZ92 322 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 ARRDC3Q96B67 414 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 LRRC46Q96FV0 321 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 PRRC1Q96M27 445 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 HIST1H2AAQ96QV6 131 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 OR1F2PQ96R84 312 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 PELOQ9BRX2 385 aaKnown RBP4.84□□□□□ -1.63
PROM1-220ENST00000540805 TMEM185BQ9H7F4 350 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 PRTFDC1Q9NRG1 225 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 SERINC1Q9NRX5 453 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 GDE1Q9NZC3 331 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 MLXQ9UH92 298 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 FLVCR2Q9UPI3 526 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 ICKQ9UPZ9 632 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 WDR45Q9Y484 360 aa4.84□□□□□ -1.63
PROM1-220ENST00000540805 SLC9B1P1A6NJY1 282 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 592.2 ms