RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CD47Q08722 323 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 MRPL49Q13405 166 aaKnown RBP9.56□□□□□ -0.88
ATL3-204ENST00000540699 TMEM44Q2T9K0 475 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.56□□□□□ -0.88
ATL3-204ENST00000540699 CTU2Q2VPK5 515 aaKnown RBP9.56□□□□□ -0.88
ATL3-204ENST00000540699 GLYR1Q49A26 553 aaPredicted RBP9.56□□□□□ -0.88
ATL3-204ENST00000540699 ALG10BQ5I7T1 473 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 WBP2NLQ6ICG8 309 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 OR5M10Q6IEU7 315 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 ARHGAP11AQ6P4F7 1023 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 GFRALQ6UXV0 394 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 Q6ZPB1 254 aaPredicted RBP9.56□□□□□ -0.88
ATL3-204ENST00000540699 RASSF6Q6ZTQ3 369 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 ATG4DQ86TL0 474 aaPredicted RBP9.56□□□□□ -0.88
ATL3-204ENST00000540699 KIF18BQ86Y91 864 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 CADM2Q8N3J6 435 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 OR5W2Q8NH69 310 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 PFN4Q8NHR9 129 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 SSC4DQ8WTU2 575 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 DNAJA4Q8WW22 397 aaPredicted RBP9.56□□□□□ -0.88
ATL3-204ENST00000540699 FAM46AQ96IP4 442 aaKnown RBP9.56□□□□□ -0.88
ATL3-204ENST00000540699 ADAM19Q9H013 955 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 DSN1Q9H410 356 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 C12orf10Q9HB07 376 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 MEPEQ9NQ76 525 aaPredicted RBP9.56□□□□□ -0.88
ATL3-204ENST00000540699 GMPPBQ9Y5P6 360 aa9.56□□□□□ -0.88
ATL3-204ENST00000540699 NCOA6Q14686 2063 aaPredicted RBP9.55□□□□□ -0.88
ATL3-204ENST00000540699 CREBBPQ92793 2442 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 IGKV1D-42A0A075B6H8 117 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 TRGV5A0A0B4J1U4 118 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 OR14I1A6ND48 311 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 ETV2O00321 342 aaPredicted RBP9.55□□□□□ -0.88
ATL3-204ENST00000540699 CDC42EP2O14613 210 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 TNFAIP8O95379 198 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 IGF2P01344 180 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 IGFBP1P08833 259 aaPredicted RBP9.55□□□□□ -0.88
ATL3-204ENST00000540699 STSP08842 583 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 SMIM18P0DKX4 95 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 MAKP20794 623 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 DPP4P27487 766 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 SLC1A3P43003 542 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 GPR4P46093 362 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 IDH2P48735 452 aaKnown RBP9.55□□□□□ -0.88
ATL3-204ENST00000540699 NUP107P57740 925 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 B3GALT5-AS1P59052 145 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 COPZ1P61923 177 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 CBFBQ13951 182 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 PTGES3Q15185 160 aaKnown RBP9.55□□□□□ -0.88
ATL3-204ENST00000540699 TOMM34Q15785 309 aaPredicted RBP9.55□□□□□ -0.88
ATL3-204ENST00000540699 SLX4IPQ5VYV7 408 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 TMPRSS11FQ6ZWK6 438 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 MEX3DQ86XN8 651 aaKnown RBP9.55□□□□□ -0.88
ATL3-204ENST00000540699 TMCO5AQ8N6Q1 288 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 CLDN22Q8N7P3 220 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 SETD9Q8NE22 299 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 FAM83FQ8NEG4 500 aaPredicted RBP9.55□□□□□ -0.88
ATL3-204ENST00000540699 OR4K17Q8NGC6 315 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 B4GALNT2Q8NHY0 566 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 NEIL3Q8TAT5 605 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 GPR119Q8TDV5 335 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 C1GALT1C1Q96EU7 318 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 SH3YL1Q96HL8 342 aaPredicted RBP9.55□□□□□ -0.88
ATL3-204ENST00000540699 YTHDF1Q9BYJ9 559 aaKnown RBP9.55□□□□□ -0.88
ATL3-204ENST00000540699 SLC6A15Q9H2J7 730 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 PTGES2Q9H7Z7 377 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 C20orf141Q9NUB4 165 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 MED11Q9P086 117 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 SPRR3Q9UBC9 169 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 RPS6KB2Q9UBS0 482 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 TMEM5Q9Y2B1 443 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 MED31Q9Y3C7 131 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 MPDZO75970 2070 aa9.55□□□□□ -0.88
ATL3-204ENST00000540699 KIAA1549Q9HCM3 1950 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 CSMD1Q96PZ7 3565 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 A0A087WZY1 265 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 A0A1B0GTH9 108 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 TRAPPC6AO75865 159 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 SOX14O95416 240 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 IFI30P13284 250 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 GABRB1P18505 474 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 PGCP20142 388 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 PTNP21246 168 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 PTGS2P35354 604 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 CCR4P51679 360 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 GFRA1P56159 465 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 HSF1Q00613 529 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 TEKQ02763 1124 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 RBPJQ06330 500 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 CDK5R2Q13319 367 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 APOFQ13790 326 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 BLMHQ13867 455 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 MAD2L1BPQ15013 274 aaPredicted RBP9.54□□□□□ -0.88
ATL3-204ENST00000540699 KCTD21Q4G0X4 260 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 C12orf73Q69YU5 71 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 VASNQ6EMK4 673 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 ZNF620Q6ZNG0 422 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 RRM2BQ7LG56 351 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 ENTHD1Q8IYW4 607 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 OR8D4Q8NGM9 314 aa9.54□□□□□ -0.88
ATL3-204ENST00000540699 APH1BQ8WW43 257 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms