RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 A0A1B0GX12 115 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 AQP7P3A6NL99 342 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 ELOA3DA6NLF2 546 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-212ENST00000540230 KLF4O43474 513 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 GOSR1O95249 250 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 NPPAP01160 153 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 COX4I1P13073 169 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 IGHV1-2P23083 117 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 RPS5P46782 204 aaKnown RBP13.32□□□□□ -0.28
UBE3B-212ENST00000540230 NCALDP61601 193 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 ITGADQ13349 1161 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 TESK1Q15569 626 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 ELOA3BQ3SY89 546 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 ZNF100Q8IYN0 542 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 PCYOX1LQ8NBM8 494 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 ELOA3Q8NG57 546 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 OR6T1Q8NGN1 323 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 RP9Q8TA86 221 aaKnown RBP13.32□□□□□ -0.28
UBE3B-212ENST00000540230 VANGL1Q8TAA9 524 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-212ENST00000540230 ZNF385AQ96PM9 386 aaKnown RBP13.32□□□□□ -0.28
UBE3B-212ENST00000540230 ECSITQ9BQ95 431 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 NAA11Q9BSU3 229 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-212ENST00000540230 TRIM2Q9C040 744 aa13.32□□□□□ -0.28
UBE3B-212ENST00000540230 CCM2LQ9NUG4 571 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-212ENST00000540230 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.31□□□□□ -0.28
UBE3B-212ENST00000540230 AHSA1O95433 338 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 THY1P04216 161 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 COX5AP20674 150 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 ALKBH2Q6NS38 261 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 CASP12Q6UXS9 341 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 CCDC80Q76M96 950 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 PATL1Q86TB9 770 aaKnown RBP13.31□□□□□ -0.28
UBE3B-212ENST00000540230 WFDC8Q8IUA0 241 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 SLC30A8Q8IWU4 369 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 ZIC4Q8N9L1 334 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 BHLHE22Q8NFJ8 381 aaPredicted RBP13.31□□□□□ -0.28
UBE3B-212ENST00000540230 KISS1RQ969F8 398 aaPredicted RBP13.31□□□□□ -0.28
UBE3B-212ENST00000540230 SLC38A4Q969I6 547 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 TAAR8Q969N4 342 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 SLC25A36Q96CQ1 311 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 SH3GL1Q99961 368 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 TAPBPLQ9BX59 468 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 MYLK2Q9H1R3 596 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 C12orf10Q9HB07 376 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 GID8Q9NWU2 228 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 CMTM6Q9NX76 183 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 SLC13A4Q9UKG4 626 aa13.31□□□□□ -0.28
UBE3B-212ENST00000540230 ENO4A6NNW6 628 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 GPR171O14626 319 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 AIM2O14862 343 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 SNX3O60493 162 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 CCDC22O60826 627 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 PNMTP11086 282 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 PPP3CBP16298 524 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 TNFRSF1BP20333 461 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 CBLP22681 906 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 IL32P24001 234 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 CDH12P55289 794 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 TAB1Q15750 504 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 INTS11Q5TA45 600 aaKnown RBP13.3□□□□□ -0.28
UBE3B-212ENST00000540230 FAM91A1Q658Y4 838 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 ULK3Q6PHR2 472 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 SEZ6L2Q6UXD5 910 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 PAMR1Q6UXH9 720 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 BHLHA15Q7RTS1 189 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-212ENST00000540230 GPAT4Q86UL3 456 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 KDM8Q8N371 416 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 STEAP2Q8NFT2 490 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 OR9K2Q8NGE7 335 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 MFSD8Q8NHS3 518 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 RNF217Q8TC41 542 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 DNAJA4Q8WW22 397 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-212ENST00000540230 APH1AQ96BI3 265 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 MCHR1Q99705 422 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 OR10A4Q9H209 315 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 FANCFQ9NPI8 374 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 RAI1Q7Z5J4 1906 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-212ENST00000540230 ROS1P08922 2347 aa13.3□□□□□ -0.28
UBE3B-212ENST00000540230 A0A087WUJ7 227 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 CPSF4LA6NMK7 179 aaKnown RBP13.29□□□□□ -0.28
UBE3B-212ENST00000540230 FAM220BPB1ANY3 271 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 FZD7O75084 574 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 MRPL33O75394 65 aaKnown RBP13.29□□□□□ -0.28
UBE3B-212ENST00000540230 LYPD3O95274 346 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 PLAUP00749 431 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 C8BP07358 591 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 GNGT1P63211 74 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 LTBQ06643 244 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 P2RY6Q15077 328 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 ENTPD8Q5MY95 495 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 TSPO2Q5TGU0 170 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 FBXW9Q5XUX1 488 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 WDR88Q6ZMY6 472 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 RANBP3LQ86VV4 465 aaPredicted RBP13.29□□□□□ -0.28
UBE3B-212ENST00000540230 SLC15A3Q8IY34 581 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 UBE2J2Q8N2K1 259 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 ZNF433Q8N7K0 673 aaPredicted RBP13.29□□□□□ -0.28
UBE3B-212ENST00000540230 SLC47A1Q96FL8 570 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 HDHD5Q9BXW7 423 aa13.29□□□□□ -0.28
UBE3B-212ENST00000540230 TMEM27Q9HBJ8 222 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms