RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 SLC7A10Q9NS82 523 aa19.53■□□□□ 0.72
SCARB1-206ENST00000539320 FAIMQ9NVQ4 179 aa19.53■□□□□ 0.72
SCARB1-206ENST00000539320 CISD1Q9NZ45 108 aaKnown RBP19.53■□□□□ 0.72
SCARB1-206ENST00000539320 MGAT4BQ9UQ53 548 aa19.53■□□□□ 0.72
SCARB1-206ENST00000539320 A8MVM7 634 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 NR5A2O00482 541 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 AKR7A3O95154 331 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 PTAFRP25105 342 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 IDH3AP50213 366 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 ZNF83P51522 516 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 VEZF1Q14119 521 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 GABRA6Q16445 453 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 ZNF311Q5JNZ3 666 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 TSPO2Q5TGU0 170 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 DTX2Q86UW9 622 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 C17orf78Q8N4C9 275 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 C1orf162Q8NEQ5 155 aaPredicted RBP19.52■□□□□ 0.72
SCARB1-206ENST00000539320 MAL2Q969L2 176 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 SLC35B4Q969S0 331 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 ATP6V1G3Q96LB4 118 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 MUS81Q96NY9 551 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 EBF4Q9BQW3 602 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 CCDC28BQ9BUN5 200 aa19.52■□□□□ 0.72
SCARB1-206ENST00000539320 ZANQ9Y493 2812 aa19.51■□□□□ 0.71
SCARB1-206ENST00000539320 A0A1W2PR80 420 aa19.51■□□□□ 0.71
SCARB1-206ENST00000539320 TMEM229AB2RXF0 380 aa19.51■□□□□ 0.71
SCARB1-206ENST00000539320 C5orf58C9J3I9 102 aa19.51■□□□□ 0.71
SCARB1-206ENST00000539320 SPOCK1Q08629 439 aa19.51■□□□□ 0.71
SCARB1-206ENST00000539320 CLEC12BQ2HXU8 276 aa19.51■□□□□ 0.71
SCARB1-206ENST00000539320 LRIF1Q5T3J3 769 aa19.51■□□□□ 0.71
SCARB1-206ENST00000539320 C9orf135Q5VTT2 229 aa19.51■□□□□ 0.71
SCARB1-206ENST00000539320 C1orf140Q5VVS0 124 aa19.51■□□□□ 0.71
SCARB1-206ENST00000539320 PIAS4Q8N2W9 510 aaPredicted RBP19.51■□□□□ 0.71
SCARB1-206ENST00000539320 SPDL1Q96EA4 605 aa19.51■□□□□ 0.71
SCARB1-206ENST00000539320 PIF1Q9H611 641 aa19.51■□□□□ 0.71
SCARB1-206ENST00000539320 ADPRHL2Q9NX46 363 aa19.51■□□□□ 0.71
SCARB1-206ENST00000539320 SLC25A37Q9NYZ2 338 aa19.51■□□□□ 0.71
SCARB1-206ENST00000539320 AHSA1O95433 338 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 CD40P25942 277 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 TGFBR3Q03167 851 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 TNK1Q13470 666 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 TTMPQ5BVD1 217 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 GCNT6Q5T4J0 391 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 BLOC1S3Q6QNY0 202 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 SLC22A25Q6T423 547 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 AAED1Q7RTV5 226 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 GPAT4Q86UL3 456 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 FUNDC1Q8IVP5 155 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 MSRB3Q8IXL7 192 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 STK35Q8TDR2 534 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 ZNF385AQ96PM9 386 aaKnown RBP19.5■□□□□ 0.71
SCARB1-206ENST00000539320 GRIP2Q9C0E4 1043 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 SLCO5A1Q9H2Y9 848 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 SLC17A5Q9NRA2 495 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 POU2F3Q9UKI9 436 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 AMDHD2Q9Y303 409 aa19.5■□□□□ 0.71
SCARB1-206ENST00000539320 M0R1B8 84 aa19.49■□□□□ 0.71
SCARB1-206ENST00000539320 NPIPB7O75200 414 aa19.49■□□□□ 0.71
SCARB1-206ENST00000539320 CD8AP01732 235 aa19.49■□□□□ 0.71
SCARB1-206ENST00000539320 ARAFP10398 606 aa19.49■□□□□ 0.71
SCARB1-206ENST00000539320 ETS2P15036 469 aa19.49■□□□□ 0.71
SCARB1-206ENST00000539320 PPIBP23284 216 aaKnown RBP19.49■□□□□ 0.71
SCARB1-206ENST00000539320 MPGP29372 298 aa19.49■□□□□ 0.71
SCARB1-206ENST00000539320 P2RY4P51582 365 aa19.49■□□□□ 0.71
SCARB1-206ENST00000539320 AQP5P55064 265 aa19.49■□□□□ 0.71
SCARB1-206ENST00000539320 ZIC4Q8N9L1 334 aa19.49■□□□□ 0.71
SCARB1-206ENST00000539320 WDR31Q8NA23 367 aa19.49■□□□□ 0.71
SCARB1-206ENST00000539320 POMGNT2Q8NAT1 580 aa19.49■□□□□ 0.71
SCARB1-206ENST00000539320 DYDC1Q8WWB3 177 aa19.49■□□□□ 0.71
SCARB1-206ENST00000539320 CCDC167Q9P0B6 97 aa19.49■□□□□ 0.71
SCARB1-206ENST00000539320 SONP18583 2426 aaKnown RBP19.49■□□□□ 0.71
SCARB1-206ENST00000539320 VAMP5O95183 116 aa19.48■□□□□ 0.71
SCARB1-206ENST00000539320 IGHV4-39P01824 125 aa19.48■□□□□ 0.71
SCARB1-206ENST00000539320 PRKAR1BP31321 381 aa19.48■□□□□ 0.71
SCARB1-206ENST00000539320 ATP4BP51164 291 aa19.48■□□□□ 0.71
SCARB1-206ENST00000539320 SLC25A3Q00325 362 aa19.48■□□□□ 0.71
SCARB1-206ENST00000539320 HOXC5Q00444 222 aa19.48■□□□□ 0.71
SCARB1-206ENST00000539320 AGAP6Q5VW22 663 aa19.48■□□□□ 0.71
SCARB1-206ENST00000539320 NFKBIDQ8NI38 313 aa19.48■□□□□ 0.71
SCARB1-206ENST00000539320 HS6ST2Q96MM7 605 aa19.48■□□□□ 0.71
SCARB1-206ENST00000539320 BARX1Q9HBU1 254 aaPredicted RBP19.48■□□□□ 0.71
SCARB1-206ENST00000539320 SLAMF8Q9P0V8 285 aa19.48■□□□□ 0.71
SCARB1-206ENST00000539320 ALPK2Q86TB3 2170 aa19.48■□□□□ 0.71
SCARB1-206ENST00000539320 E7EQL1 145 aa19.47■□□□□ 0.71
SCARB1-206ENST00000539320 PCSK6P29122 969 aa19.47■□□□□ 0.71
SCARB1-206ENST00000539320 SQLEQ14534 574 aa19.47■□□□□ 0.71
SCARB1-206ENST00000539320 PAGE3Q5JUK9 113 aa19.47■□□□□ 0.71
SCARB1-206ENST00000539320 C1QTNF12Q5T7M4 302 aa19.47■□□□□ 0.71
SCARB1-206ENST00000539320 TMEM225Q6GV28 225 aa19.47■□□□□ 0.71
SCARB1-206ENST00000539320 KLHL24Q6TFL4 600 aa19.47■□□□□ 0.71
SCARB1-206ENST00000539320 B3GLCTQ6Y288 498 aa19.47■□□□□ 0.71
SCARB1-206ENST00000539320 ABHD12BQ7Z5M8 362 aaPredicted RBP19.47■□□□□ 0.71
SCARB1-206ENST00000539320 DHRS9Q9BPW9 319 aa19.47■□□□□ 0.71
SCARB1-206ENST00000539320 TMEM45AQ9NWC5 275 aa19.47■□□□□ 0.71
SCARB1-206ENST00000539320 VAPAQ9P0L0 249 aa19.47■□□□□ 0.71
SCARB1-206ENST00000539320 RPS6KB2Q9UBS0 482 aa19.47■□□□□ 0.71
SCARB1-206ENST00000539320 RASD1Q9Y272 281 aa19.47■□□□□ 0.71
SCARB1-206ENST00000539320 ABCA1O95477 2261 aa19.47■□□□□ 0.71
SCARB1-206ENST00000539320 HEATR1Q9H583 2144 aaKnown RBP19.46■□□□□ 0.71
SCARB1-206ENST00000539320 TRBV5-3A0A0A0MS03 114 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms