RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 GNB5O14775 395 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 FRS3O43559 492 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 TNFSF13O75888 250 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 LINGO3P0C6S8 592 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 GKN3PP0CG01 181 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 PGCP20142 388 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 SLC7A1P30825 629 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 SLC6A8P48029 635 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 P2RX1P51575 399 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 ZNF41P51814 821 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 TAS2R41P59536 307 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 CBFBQ13951 182 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 TOMM20Q15388 145 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 CD226Q15762 336 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 NRF1Q16656 503 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 NDUFAF6Q330K2 333 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 AP1ARQ63HQ0 302 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 OR5M10Q6IEU7 315 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 TMEM81Q6P7N7 255 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 APOOLQ6UXV4 268 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 GRAMD2AQ8IUY3 354 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 ADGRG5Q8IZF4 528 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 OR1J4Q8NGS1 313 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 DUSP19Q8WTR2 217 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 SLC35B4Q969S0 331 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 UCN2Q96RP3 112 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 MCHR1Q99705 422 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 ARHGDIGQ99819 225 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 ANGPTL4Q9BY76 406 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 LAT2Q9GZY6 243 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 TMEM27Q9HBJ8 222 aa11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 EXOSC3Q9NQT5 275 aaKnown RBP11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 TESQ9UGI8 421 aaKnown RBP11.17□□□□□ -0.62
CLSTN3-208ENST00000538933 CPSF4LA6NMK7 179 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 H0Y3Z8 333 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 SNPHO15079 494 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 TRAPPC6AO75865 159 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 BAG2O95816 211 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 MT-ND1P03886 318 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 FCGR1AP12314 374 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 YAP1P46937 504 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 ATP5J2P56134 94 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 ZNF117Q03924 483 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 RUNX1T1Q06455 604 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 CLEC12BQ2HXU8 276 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 AAGABQ6PD74 315 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 PLXDC2Q6UX71 529 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 CADM2Q8N3J6 435 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 OR6T1Q8NGN1 323 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 INTS12Q96CB8 462 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 TMEM41AQ96HV5 264 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 ZFP3Q96NJ6 502 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 GNRHR2Q96P88 292 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 ZNF347Q96SE7 839 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 TUBA1CQ9BQE3 449 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 CHID1Q9BWS9 393 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 PIGMQ9H3S5 423 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 DSN1Q9H410 356 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 S100A14Q9HCY8 104 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 ZNF226Q9NYT6 803 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 MED11Q9P086 117 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 DKKL1Q9UK85 242 aa11.16□□□□□ -0.62
CLSTN3-208ENST00000538933 TMCC2O75069 709 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 TIPRLO75663 272 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 KRT36O76013 467 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 CST1P01037 141 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 TP53P04637 393 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 CPN1P15169 458 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 FASP25445 335 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 CCKARP32238 428 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 PTGDSP41222 190 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 SUMO3P55854 103 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 VLDLRP98155 873 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 HOXC5Q00444 222 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 SPIBQ01892 262 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 EPS8Q12929 822 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 SKP2Q13309 424 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 WIPI1Q5MNZ9 446 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 DNM1P46Q6ZS02 220 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 PLCZ1Q86YW0 608 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 OR5W2Q8NH69 310 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 TMEM171Q8WVE6 324 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 TMEM234Q8WY98 164 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 ABTB1Q969K4 478 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 TM9SF2Q99805 663 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 FNDC11Q9BVV2 318 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 RTN4RQ9BZR6 473 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 TRIM2Q9C040 744 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 AMBRA1Q9C0C7 1298 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 IL1RAPQ9NPH3 570 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 CTPS2Q9NRF8 586 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 ENPP4Q9Y6X5 453 aa11.15□□□□□ -0.62
CLSTN3-208ENST00000538933 A8MV72 311 aaPredicted RBP11.14□□□□□ -0.63
CLSTN3-208ENST00000538933 MSTNO14793 375 aa11.14□□□□□ -0.63
CLSTN3-208ENST00000538933 ADAMDEC1O15204 470 aa11.14□□□□□ -0.63
CLSTN3-208ENST00000538933 OIP5O43482 229 aa11.14□□□□□ -0.63
CLSTN3-208ENST00000538933 BCAS1O75363 584 aaPredicted RBP11.14□□□□□ -0.63
CLSTN3-208ENST00000538933 DEAF1O75398 565 aaPredicted RBP11.14□□□□□ -0.63
CLSTN3-208ENST00000538933 E2F6O75461 281 aa11.14□□□□□ -0.63
CLSTN3-208ENST00000538933 SEMG1P04279 462 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms