RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 ZNF628Q5EBL2 1059 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 SHEQ5VZ18 495 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 CARD17Q5XLA6 110 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 SMARCD3Q6STE5 483 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 GDPD3Q7L5L3 318 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 SULF2Q8IWU5 870 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 CNOT9Q92600 299 aaKnown RBP8.02□□□□□ -1.13
GGA3-202ENST00000538886 COQ8BQ96D53 544 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 ZNF285Q96NJ3 590 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 CCDC115Q96NT0 180 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 PINK1Q9BXM7 581 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 GON7Q9BXV9 100 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 MMP25Q9NPA2 562 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 MLXQ9UH92 298 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 RPS6KA6Q9UK32 745 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 SESN1Q9Y6P5 492 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 POM121CA8CG34 1229 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 TOR1AO14656 332 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 ZNF264O43296 627 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 SYNGR4O95473 234 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 TRHRP34981 398 aaPredicted RBP8.02□□□□□ -1.13
GGA3-202ENST00000538886 ATP12AP54707 1039 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 POLR2GP62487 172 aaKnown RBP eCLIP8.02□□□□□ -1.13
GGA3-202ENST00000538886 C17orf67Q0P5P2 114 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 PLEKHN1Q494U1 663 aaPredicted RBP8.02□□□□□ -1.13
GGA3-202ENST00000538886 EIPR1Q53HC9 387 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.02□□□□□ -1.13
GGA3-202ENST00000538886 ZAR1Q86SH2 424 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 COMMD7Q86VX2 200 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 KDM8Q8N371 416 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 TMEM234Q8WY98 164 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 ZNF681Q96N22 645 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 KCNS3Q9BQ31 491 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 IKZF5Q9H5V7 419 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 PLSCR2Q9NRY7 297 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 ING3Q9NXR8 418 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 SEMA5BQ9P283 1151 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 IL20RAQ9UHF4 553 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 POLR1DQ9Y2S0 133 aa8.02□□□□□ -1.13
GGA3-202ENST00000538886 A0A1W2PNR3 127 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 PRORSD1PA6NEY8 169 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 SMLR1H3BR10 107 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 SP1P08047 785 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 TGFBR1P36897 503 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 RPS7P62081 194 aaKnown RBP8.01□□□□□ -1.13
GGA3-202ENST00000538886 PSG6Q00889 435 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 FADDQ13158 208 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 PIN1Q13526 163 aaPredicted RBP8.01□□□□□ -1.13
GGA3-202ENST00000538886 CYBRD1Q53TN4 286 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 ZNF619Q8N2I2 560 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 DOK1Q99704 481 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 HDHD5Q9BXW7 423 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 ZNF700Q9H0M5 742 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 PPIL3Q9H2H8 161 aaKnown RBP8.01□□□□□ -1.13
GGA3-202ENST00000538886 PCDHB16Q9NRJ7 776 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 CES1P1Q9UKY3 287 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 EXO1Q9UQ84 846 aaKnown RBP8.01□□□□□ -1.13
GGA3-202ENST00000538886 SAMHD1Q9Y3Z3 626 aaKnown RBP8.01□□□□□ -1.13
GGA3-202ENST00000538886 A0A0X1KG70 313 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 FAM25EA8MYX2 175 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 SNX4O95219 450 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 HLA-DQA2P01906 255 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 S100A9P06702 114 aaKnown RBP8.01□□□□□ -1.13
GGA3-202ENST00000538886 CD36P16671 472 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 HTR3AP46098 478 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 MFAP5Q13361 173 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 QPRTQ15274 297 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 ALG10BQ5I7T1 473 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 JMJD6Q6NYC1 403 aaPredicted RBP8.01□□□□□ -1.13
GGA3-202ENST00000538886 TMEM205Q6UW68 189 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 PLXDC2Q6UX71 529 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 KIF18BQ86Y91 864 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 TRIB1Q96RU8 372 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 SPOCK3Q9BQ16 436 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 TRAF4Q9BUZ4 470 aaPredicted RBP8.01□□□□□ -1.13
GGA3-202ENST00000538886 LYVE1Q9Y5Y7 322 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 MED13LQ71F56 2210 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 CHD6Q8TD26 2715 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 SULT2B1O00204 365 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 SEC14L2O76054 403 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 AHSA1O95433 338 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 GLAP06280 429 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 FCGR1AP12314 374 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 MLF1P58340 268 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 Q0VFX4 171 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 ZNF385CQ66K41 422 aaPredicted RBP8.01□□□□□ -1.13
GGA3-202ENST00000538886 CBLN3Q6UW01 205 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 ZNF767PQ75MW2 155 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 ZNF540Q8NDQ6 660 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 OR51A7Q8NH64 312 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 LHFPL5Q8TAF8 219 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 LGALS12Q96DT0 336 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 BCL7BQ9BQE9 202 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 SLC26A1Q9H2B4 701 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 PPA2Q9H2U2 334 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 C12orf49Q9H741 205 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 REEP1Q9H902 201 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 IFT46Q9NQC8 304 aa8.01□□□□□ -1.13
GGA3-202ENST00000538886 THUMPD1Q9NXG2 353 aaKnown RBP8.01□□□□□ -1.13
GGA3-202ENST00000538886 FLRT3Q9NZU0 649 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms