RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 C1QL3Q5VWW1 255 aa12.75□□□□□ -0.37
CD4-208ENST00000538827 C5orf46Q6UWT4 87 aa12.75□□□□□ -0.37
CD4-208ENST00000538827 NANOGNBQ7Z5D8 188 aa12.75□□□□□ -0.37
CD4-208ENST00000538827 FAM109AQ8N4B1 249 aa12.75□□□□□ -0.37
CD4-208ENST00000538827 RBMXL3Q8N7X1 1067 aaKnown RBP12.75□□□□□ -0.37
CD4-208ENST00000538827 TEX47Q8TBZ9 253 aa12.75□□□□□ -0.37
CD4-208ENST00000538827 TAAR8Q969N4 342 aa12.75□□□□□ -0.37
CD4-208ENST00000538827 MOGAT1Q96PD6 335 aa12.75□□□□□ -0.37
CD4-208ENST00000538827 TAPBPLQ9BX59 468 aa12.75□□□□□ -0.37
CD4-208ENST00000538827 GABARAPL3Q9BY60 117 aa12.75□□□□□ -0.37
CD4-208ENST00000538827 DEFB127Q9H1M4 99 aa12.75□□□□□ -0.37
CD4-208ENST00000538827 TSPAN10Q9H1Z9 355 aaPredicted RBP12.75□□□□□ -0.37
CD4-208ENST00000538827 Q9H521 79 aa12.75□□□□□ -0.37
CD4-208ENST00000538827 LDAHQ9H6V9 325 aa12.75□□□□□ -0.37
CD4-208ENST00000538827 LIPGQ9Y5X9 500 aa12.75□□□□□ -0.37
CD4-208ENST00000538827 CDH10Q9Y6N8 788 aa12.75□□□□□ -0.37
CD4-208ENST00000538827 BOD1L1Q8NFC6 3051 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 A0A1W2PNR3 127 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 BCKDKO14874 412 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 EFNA2O43921 213 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 HCN1O60741 890 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 BGLAPP02818 100 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 HIST1H2ABP04908 130 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 HPNP05981 417 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 POLR2IP36954 125 aaKnown RBP12.74□□□□□ -0.37
CD4-208ENST00000538827 NUP107P57740 925 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 B3GALT5-AS1P59052 145 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 NPRL3Q12980 569 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 TMEM44Q2T9K0 475 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 TMEM176BQ3YBM2 270 aaPredicted RBP12.74□□□□□ -0.37
CD4-208ENST00000538827 C4orf17Q53FE4 359 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 SLC6A19Q695T7 634 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 ZNF620Q6ZNG0 422 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 Q6ZPB1 254 aaPredicted RBP12.74□□□□□ -0.37
CD4-208ENST00000538827 RASSF6Q6ZTQ3 369 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 TMPRSS11FQ6ZWK6 438 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 HIST3H2AQ7L7L0 130 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 OAFQ86UD1 273 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 KIF18BQ86Y91 864 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 UBQLNLQ8IYU4 475 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 PARP8Q8N3A8 854 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 IQCF1Q8N6M8 205 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 LRRC17Q8N6Y2 441 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 OR52L1Q8NGH7 329 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 OR51A7Q8NH64 312 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 HIST1H2ACQ93077 130 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 ARL5BQ96KC2 179 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 ZNF570Q96NI8 536 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 PTDSS2Q9BVG9 487 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 ASPNQ9BXN1 380 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 ADNPQ9H2P0 1102 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 FKRPQ9H9S5 495 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 NANSQ9NR45 359 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 REV1Q9UBZ9 1251 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 RAB26Q9ULW5 256 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 ZNF337Q9Y3M9 751 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 MED12Q93074 2177 aa12.74□□□□□ -0.37
CD4-208ENST00000538827 USP9YO00507 2555 aaPredicted RBP12.73□□□□□ -0.37
CD4-208ENST00000538827 GJE1A6NN92 205 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 SFTPCP11686 197 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 CHMP24386 653 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 SLC9A3P48764 834 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 CRISP1P54107 249 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 OR2B6P58173 313 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 ESRRGP62508 458 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 COX10Q12887 443 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 MYBPHQ13203 477 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 HYAL4Q2M3T9 481 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 LINC00303Q3SY05 128 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 NADK2Q4G0N4 442 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 CLEC12AQ5QGZ9 265 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 FAM69AQ5T7M9 428 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 Q6ZS92 163 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 MAMDC2Q7Z304 686 aaPredicted RBP12.73□□□□□ -0.37
CD4-208ENST00000538827 OR8D4Q8NGM9 314 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 SAMD8Q96LT4 415 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 CNBD2Q96M20 576 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 KLHL15Q96M94 604 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 PLA2G12AQ9BZM1 189 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 NDEL1Q9GZM8 345 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 OR52D1Q9H346 318 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 FAM118AQ9NWS6 357 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 QPCTLQ9NXS2 382 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 IL20RAQ9UHF4 553 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 B3GNT3Q9Y2A9 372 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 MRPS18CQ9Y3D5 142 aaKnown RBP12.73□□□□□ -0.37
CD4-208ENST00000538827 GMPPBQ9Y5P6 360 aa12.73□□□□□ -0.37
CD4-208ENST00000538827 NBPF19A0A087WUL8 3843 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 HTR3EA5X5Y0 456 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 M0R129 80 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 EIF1AYO14602 144 aaKnown RBP12.72□□□□□ -0.37
CD4-208ENST00000538827 TNFSF11O14788 317 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 OR2T1O43869 369 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 NPIPB7O75200 414 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 CLIC3O95833 236 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 MT-ATP6P00846 226 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 IGF2P01344 180 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 TP53P04637 393 aaPredicted RBP12.72□□□□□ -0.37
CD4-208ENST00000538827 IMPDH2P12268 514 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 EPHA2P29317 976 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms