RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 OR9A2Q8NGT5 310 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 PBX4Q9BYU1 374 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 CYB5R1Q9UHQ9 305 aa17.12■□□□□ 0.33
SFSWAP-207ENST00000538548 RFPL4AA6NLU0 287 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 DUXAA6NLW8 204 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 RFPL4AL1F8VTS6 287 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 ADAM11O75078 769 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 ATG12O94817 140 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 OR2T7P0C7T2 308 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 CLDN12P56749 244 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 TAS2R20P59543 309 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 SORDQ00796 357 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 NDUFAF6Q330K2 333 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 EIPR1Q53HC9 387 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 CCDC157Q569K6 752 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 DNM1P46Q6ZS02 220 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 RAB11FIP2Q7L804 512 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 TMIEQ8NEW7 156 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 OR2T27Q8NH04 317 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 TNFAIP8L1Q8WVP5 186 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 BPIFA2Q96DR5 249 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 IGSF21Q96ID5 467 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 OR5V1Q9UGF6 321 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 V9GY05 133 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 ARPC4-TTLL3A0A0A6YYG9 625 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 PQLC2LA1A4F0 135 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 EIF4E2O60573 245 aaKnown RBP17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 AIFM1O95831 613 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 APOC1P02654 83 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 RLN1P04808 185 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 CALCBP10092 127 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 CNR1P21554 472 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 CSNK1G2P78368 415 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 ELP2Q6IA86 826 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 TCEAL8Q8IYN2 117 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 SLAIN1Q8ND83 568 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 SNX33Q8WV41 574 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 MIB2Q96AX9 1013 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 NARS2Q96I59 477 aaKnown RBP17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 CES1P1Q9UKY3 287 aa17.11■□□□□ 0.33
SFSWAP-207ENST00000538548 TBC1D3EA0A087X179 549 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 ZNF254O75437 659 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 HIST1H1TP22492 207 aaPredicted RBP17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 GPR1P46091 355 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 RAB13P51153 203 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 UBE2MP61081 183 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 GAS6Q14393 721 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 SLC48A1Q6P1K1 146 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 C11orf88Q6PI97 169 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 CCDC36Q8IYA8 594 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 CRIPAKQ8N1N5 446 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 OR8K3Q8NH51 312 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 OR5K2Q8NHB8 316 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 KLHL31Q9H511 634 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 ESRP2Q9H6T0 727 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 FANCFQ9NPI8 374 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 GNG8Q9UK08 70 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 WDR45Q9Y484 360 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 PRRC2BQ5JSZ5 2229 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 SCN5AQ14524 2016 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 TMEM272A0A1B0GTI8 110 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 A0A1W2PPV9 198 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 HTR2AP28223 471 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 NDUFS1P28331 727 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 RORAP35398 523 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 CLDN2P57739 230 aa17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 RPS15P62841 145 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 EEF1A1P68104 462 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 MRM1Q6IN84 353 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 CNN2Q99439 309 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-207ENST00000538548 TRAV27A0A087WT01 109 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 ACOD1A6NK06 481 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 PPP1R3DO95685 299 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 RPN2P04844 631 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 F3P13726 295 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 STARP49675 285 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 MYO7AQ13402 2215 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 RAB33AQ14088 237 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 RPE65Q16518 533 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 FAM74A1Q5RGS3 127 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 STPG1Q5TH74 334 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 UQCC3Q6UW78 93 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 PARS2Q7L3T8 475 aaKnown RBP17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 DENND4AQ7Z401 1863 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 GLB1L2Q8IW92 636 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 ARL14Q8N4G2 192 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 ACOT4Q8N9L9 421 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 POMGNT2Q8NAT1 580 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 SLC16A11Q8NCK7 471 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 OR6N1Q8NGY5 312 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 ZMYND19Q96E35 227 aaPredicted RBP17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 MENTQ9BUN1 341 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 TMEM138Q9NPI0 162 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 A0A0D9SG52 128 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 ERI3O43414 337 aaKnown RBP17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 CTNSO60931 367 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 IFNGP01579 166 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 FNTBP49356 437 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 OR1Q1Q15612 314 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms