RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 GPR34Q9UPC5 381 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 TRAPPC4Q9Y296 219 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 OTOL1A6NHN0 477 aaPredicted RBP6.46□□□□□ -1.38
SORT1-209ENST00000538502 PPP5D1E7EU14 171 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 I6L893 689 aaPredicted RBP6.46□□□□□ -1.38
SORT1-209ENST00000538502 HSD17B7P56937 341 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 FOXK1P85037 733 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 C18orf21Q32NC0 220 aaPredicted RBP6.46□□□□□ -1.38
SORT1-209ENST00000538502 DEFB134Q4QY38 66 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 EXOSC6Q5RKV6 272 aaKnown RBP6.46□□□□□ -1.38
SORT1-209ENST00000538502 ZNF485Q8NCK3 441 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 OR9A2Q8NGT5 310 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 TMEM18Q96B42 140 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 C3orf30Q96M34 536 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 SLC46A1Q96NT5 459 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 OR1F2PQ96R84 312 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 FIZ1Q96SL8 496 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 NECAP2Q9NVZ3 263 aa6.46□□□□□ -1.38
SORT1-209ENST00000538502 ANTXRLA6NF34 631 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 H0YIV9 168 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 PER3P56645 1201 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 MOGAT2Q3SYC2 334 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 PXDC1Q5TGL8 231 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 MRPL21Q7Z2W9 205 aaKnown RBP6.45□□□□□ -1.38
SORT1-209ENST00000538502 OR4F15Q8NGB8 312 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 OR51L1Q8NGJ5 315 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 OR6M1Q8NGM8 313 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 DYNC2LI1Q8TCX1 351 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 YIPF6Q96EC8 236 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 MOCOSQ96EN8 888 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 ZNF583Q96ND8 569 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 UBL7Q96S82 380 aaPredicted RBP6.45□□□□□ -1.38
SORT1-209ENST00000538502 ZDHHC5Q9C0B5 715 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 CHRDQ9H2X0 955 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 C11orf49Q9H6J7 331 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 PURGQ9UJV8 347 aaKnown RBP6.45□□□□□ -1.38
SORT1-209ENST00000538502 PRAMEF27A3QJZ7 478 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 CEBPZOSA8MTT3 80 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 A8MVM7 634 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 DUX1O43812 170 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 KCNK5O95279 499 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 SNRPBP14678 240 aaKnown RBP6.45□□□□□ -1.38
SORT1-209ENST00000538502 PTNP21246 168 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 APLNRP35414 380 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 PSMB10P40306 273 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 ELAVL3Q14576 367 aaKnown RBP6.45□□□□□ -1.38
SORT1-209ENST00000538502 KIR2DS3Q14952 304 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 PHYHD1Q5SRE7 291 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 PRAMEF9Q5VWM5 478 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 SIGIRRQ6IA17 410 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 LCN10Q6JVE6 187 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 FIGLAQ6QHK4 219 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 DPY19L2P2Q6ZN68 376 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 TIPARPQ7Z3E1 657 aaKnown RBP6.45□□□□□ -1.38
SORT1-209ENST00000538502 MISPQ8IVT2 679 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 LMX1AQ8TE12 382 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 SCLYQ96I15 445 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 LYSMD1Q96S90 227 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 CCNL2Q96S94 520 aaPredicted RBP6.45□□□□□ -1.38
SORT1-209ENST00000538502 ZFYVE21Q9BQ24 234 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 RNF39Q9H2S5 420 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 BCAS3Q9H6U6 928 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 SIDT1Q9NXL6 827 aaKnown RBP6.45□□□□□ -1.38
SORT1-209ENST00000538502 MYOTQ9UBF9 498 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 HOXC11O43248 304 aaPredicted RBP6.45□□□□□ -1.38
SORT1-209ENST00000538502 CHRM2P08172 466 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 HNRNPA1P09651 372 aaKnown RBP eCLIP6.45□□□□□ -1.38
SORT1-209ENST00000538502 ADRA1AP35348 466 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 AHRP35869 848 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 MC3RP41968 323 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 CAMK2BQ13554 666 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 COTL1Q14019 142 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 SLC9A3R2Q15599 337 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 BEX5Q5H9J7 111 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 SFRP5Q5T4F7 317 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 ATPAF1Q5TC12 328 aaPredicted RBP6.45□□□□□ -1.38
SORT1-209ENST00000538502 TTLL10Q6ZVT0 673 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 TMPRSS9Q7Z410 1059 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 PRSS35Q8N3Z0 413 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 KLHDC7BQ96G42 594 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 UBXN10Q96LJ8 280 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 VPS25Q9BRG1 176 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 ALOXE3Q9BYJ1 711 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 NOX4Q9NPH5 578 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 KDM3BQ7LBC6 1761 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 MYH2Q9UKX2 1941 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 A8MU76 341 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 LDB2O43679 373 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 APOA2P02652 100 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 ALKBH1Q13686 389 aaKnown RBP6.45□□□□□ -1.38
SORT1-209ENST00000538502 LBHQ53QV2 105 aaPredicted RBP6.45□□□□□ -1.38
SORT1-209ENST00000538502 CST9LP1Q5W188 147 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 LGI3Q8N145 548 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 Q8N9G6 341 aaPredicted RBP6.45□□□□□ -1.38
SORT1-209ENST00000538502 SHDQ96IW2 340 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 SGCZQ96LD1 299 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 ZNF778Q96MU6 729 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 ELOVL3Q9HB03 270 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 IL17CQ9P0M4 197 aa6.45□□□□□ -1.38
SORT1-209ENST00000538502 SNX11Q9Y5W9 270 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms