RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 RDH16O75452 317 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 NSA2O95478 260 aaKnown RBP4.54□□□□□ -1.68
CLIP1-207ENST00000536634 IGHG3P01860 377 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 RPN2P04844 631 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 PEX19P40855 299 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 CDKN2BP42772 138 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 MAGEA5P43359 124 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 SLC6A12P48065 614 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 GEMP55040 296 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 OR4D2P58180 307 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 UBE2HP62256 183 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 PLOD1Q02809 727 aaPredicted RBP4.54□□□□□ -1.68
CLIP1-207ENST00000536634 ACTN3Q08043 901 aaPredicted RBP4.54□□□□□ -1.68
CLIP1-207ENST00000536634 CAPRIN1Q14444 709 aaKnown RBP4.54□□□□□ -1.68
CLIP1-207ENST00000536634 ITIH4Q14624 930 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 TAF13Q15543 124 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 NSDHLQ15738 373 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 FILIP1LQ4L180 1135 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 PODNL1Q6PEZ8 512 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 SUSD1Q6UWL2 747 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 VN1R4Q7Z5H5 301 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 VSIG1Q86XK7 387 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 KRT222Q8N1A0 295 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 CYP4Z2PQ8N1L4 340 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 TMEM251Q8N6I4 163 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 MCUQ8NE86 351 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 PLPP5Q8NEB5 264 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 NFAM1Q8NET5 270 aaPredicted RBP4.54□□□□□ -1.68
CLIP1-207ENST00000536634 OR2M7Q8NG81 312 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 OR11H4Q8NGC9 324 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 OR5T3Q8NGG3 340 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 RERGQ96A58 199 aaPredicted RBP4.54□□□□□ -1.68
CLIP1-207ENST00000536634 CAPZA3Q96KX2 299 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 LINC00479Q96M42 142 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 MS4A10Q96PG2 267 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 C19orf43Q9BQ61 176 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 RAB11FIP5Q9BXF6 653 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 TTTY12Q9BZ98 90 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 MRPS30Q9NP92 439 aaKnown RBP4.54□□□□□ -1.68
CLIP1-207ENST00000536634 SERINC1Q9NRX5 453 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 NLE1Q9NVX2 485 aaPredicted RBP4.54□□□□□ -1.68
CLIP1-207ENST00000536634 B4GALT7Q9UBV7 327 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 PCYOX1Q9UHG3 505 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 DAPK2Q9UIK4 370 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 ZNF223Q9UK11 482 aaPredicted RBP4.54□□□□□ -1.68
CLIP1-207ENST00000536634 HYOU1Q9Y4L1 999 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 PRR14LQ5THK1 2151 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 TRBV11-1A0A0K0K1C0 115 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 SAGE2PA6NJ88 616 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 AHCYL1O43865 530 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 CST8O60676 142 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 OR6B1O95007 311 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 OR56A5P0C7T3 313 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 ERGP11308 486 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 EZRP15311 586 aaKnown RBP4.53□□□□□ -1.68
CLIP1-207ENST00000536634 CA6P23280 308 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 MSNP26038 577 aaKnown RBP4.53□□□□□ -1.68
CLIP1-207ENST00000536634 CMPK1P30085 196 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 ZNF136P52737 540 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 PLGLB1Q02325 96 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 POU6F1Q14863 301 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 XKR6Q5GH73 641 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 ALKBH5Q6P6C2 394 aaKnown RBP4.53□□□□□ -1.68
CLIP1-207ENST00000536634 PCGF5Q86SE9 256 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 CCDC50Q8IVM0 306 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 APCDD1LQ8NCL9 501 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 ASZ1Q8WWH4 475 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 RAD51AP1Q96B01 352 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 TMCO6Q96DC7 493 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 ABHD1Q96SE0 405 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 VAT1Q99536 393 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 CCL19Q99731 98 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 TBL1YQ9BQ87 522 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 LIN28AQ9H9Z2 209 aaKnown RBP4.53□□□□□ -1.68
CLIP1-207ENST00000536634 Q9N2K0 584 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 EQTNQ9NQ60 294 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 ZDHHC18Q9NUE0 388 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 CRNNQ9UBG3 495 aaPredicted RBP4.53□□□□□ -1.68
CLIP1-207ENST00000536634 TAC3Q9UHF0 121 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 TMEM5Q9Y2B1 443 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 NINQ8N4C6 2090 aa4.53□□□□□ -1.68
CLIP1-207ENST00000536634 ATP6AP2A0A1C7CYW4 349 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 MSGN1A6NI15 193 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 GLOD5A6NK44 160 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 A8MUA0 341 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 B4GALT2O60909 372 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 KHDRBS3O75525 346 aaKnown RBP4.52□□□□□ -1.69
CLIP1-207ENST00000536634 ATP6AP2O75787 350 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 ANXA9O76027 345 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 SIX3O95343 332 aaPredicted RBP4.52□□□□□ -1.69
CLIP1-207ENST00000536634 GOT2P00505 430 aaKnown RBP4.52□□□□□ -1.69
CLIP1-207ENST00000536634 FHP07954 510 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 IGHV4-31P0DP07 118 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 PSMA3P25788 255 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 RPA3P35244 121 aaPredicted RBP4.52□□□□□ -1.69
CLIP1-207ENST00000536634 SLC9A3P48764 834 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 DNASE1L1P49184 302 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 BTG2P78543 158 aa4.52□□□□□ -1.69
CLIP1-207ENST00000536634 MYL5Q02045 173 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms