RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 OR10AD1Q8NGE0 317 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 OR6X1Q8NH79 312 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 NFKBIDQ8NI38 313 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 MAFIPQ8WZ33 124 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 PNPLA2Q96AD5 504 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 APIPQ96GX9 242 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 SHDQ96IW2 340 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 CASD1Q96PB1 797 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 GPA33Q99795 319 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 NRIP2Q9BQI9 281 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 DDA1Q9BW61 102 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 BCO2Q9BYV7 579 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 PLA2G12AQ9BZM1 189 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 PIGMQ9H3S5 423 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 BCO1Q9HAY6 547 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 NT5MQ9NPB1 228 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 OR2S2Q9NQN1 319 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 GKN1Q9NS71 199 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 SHPKQ9UHJ6 478 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 RUVBL1Q9Y265 456 aaKnown RBP3.43□□□□□ -1.86
MCF2-210ENST00000536274 AK6Q9Y3D8 172 aaKnown RBP3.43□□□□□ -1.86
MCF2-210ENST00000536274 CCL27Q9Y4X3 112 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 MCM3APO60318 1980 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 A0A087WV62 115 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 C7orf77A4D0Y5 90 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 SLC38A8A6NNN8 435 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 A8MWP6 167 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 LOC730098B7Z3J9 87 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 WNT9AO14904 365 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 RNF13O43567 381 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 KERAO60938 352 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 RAB36O95755 333 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 IL18BPO95998 194 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 CYB5R3P00387 301 aaPredicted RBP3.43□□□□□ -1.86
MCF2-210ENST00000536274 ICAM1P05362 532 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 HOXB5P09067 269 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 PRPS2P11908 318 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 HOXA5P20719 270 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 IL2RGP31785 369 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 MRPL19P49406 292 aaKnown RBP3.43□□□□□ -1.86
MCF2-210ENST00000536274 GSK3AP49840 483 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 PRKXP51817 358 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 LIM2P55344 173 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 RPS26P62854 115 aaKnown RBP3.43□□□□□ -1.86
MCF2-210ENST00000536274 GTF2H2Q13888 395 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 IFI44LQ53G44 452 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 XKR6Q5GH73 641 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 ZNF311Q5JNZ3 666 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 SAPCD1Q5SSQ6 148 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 ZDHHC20Q5W0Z9 365 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 AFMIDQ63HM1 303 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 KIAA0930Q6ICG6 404 aaPredicted RBP3.43□□□□□ -1.86
MCF2-210ENST00000536274 OR10K2Q6IF99 312 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 TAPT1Q6NXT6 567 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 JMJD6Q6NYC1 403 aaPredicted RBP3.43□□□□□ -1.86
MCF2-210ENST00000536274 GTF2H2CQ6P1K8 395 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 SFXN4Q6P4A7 337 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 ARL9Q6T311 187 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 DHRS11Q6UWP2 260 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 TMEM108Q6UXF1 575 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 HIST2H3AQ71DI3 136 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 ERASQ7Z444 233 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 CPOQ8IVL8 374 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 SLITRK4Q8IW52 837 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 BPIFB2Q8N4F0 458 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 SLC44A3Q8N4M1 653 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 OR5D16Q8NGK9 328 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 OR8S1Q8NH09 359 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 OR5K2Q8NHB8 316 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 STAG3L4Q8TBR4 150 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 C16orf78Q8WTQ4 265 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 TNFAIP8L1Q8WVP5 186 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 WFDC12Q8WWY7 111 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 RSC1A1Q92681 617 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 ZNF582Q96NG8 517 aaPredicted RBP3.43□□□□□ -1.86
MCF2-210ENST00000536274 DERL3Q96Q80 235 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 GPR20Q99678 358 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 MGME1Q9BQP7 344 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 TM6SF2Q9BZW4 377 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 RAB33BQ9H082 229 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 UBE2ZQ9H832 354 aaPredicted RBP3.43□□□□□ -1.86
MCF2-210ENST00000536274 MED20Q9H944 212 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 SFXN1Q9H9B4 322 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 RNF122Q9H9V4 155 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 LRTM1Q9HBL6 345 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 SMCO4Q9NRQ5 59 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 SEMA3GQ9NS98 782 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 ELOVL2Q9NXB9 296 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 RCC2Q9P258 522 aaKnown RBP3.43□□□□□ -1.86
MCF2-210ENST00000536274 AMDHD2Q9Y303 409 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 MRPS18CQ9Y3D5 142 aaKnown RBP3.43□□□□□ -1.86
MCF2-210ENST00000536274 SPTBP11277 2137 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 ARID1BQ8NFD5 2236 aaPredicted RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 SPEGQ15772 3267 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SCN1AP35498 2009 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 FANCMQ8IYD8 2048 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 A0A087WV48 116 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 A0A1W2PRB8 838 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 OR2AT4A6NND4 320 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 KDM4EB2RXH2 506 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms